RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 GLYCTKQ8IVS8 523 aa20.56■□□□□ 0.88
ECM1-207ENST00000498579 MYCT1Q8N699 235 aa20.56■□□□□ 0.88
ECM1-207ENST00000498579 LNX1Q8TBB1 728 aaPredicted RBP20.56■□□□□ 0.88
ECM1-207ENST00000498579 LARP4BQ92615 738 aaKnown RBP20.56■□□□□ 0.88
ECM1-207ENST00000498579 PRRX2Q99811 253 aa20.56■□□□□ 0.88
ECM1-207ENST00000498579 REEP2Q9BRK0 252 aa20.56■□□□□ 0.88
ECM1-207ENST00000498579 CXCL16Q9H2A7 254 aa20.56■□□□□ 0.88
ECM1-207ENST00000498579 ZSCAN16Q9H4T2 348 aaPredicted RBP20.56■□□□□ 0.88
ECM1-207ENST00000498579 PLEKHA5Q9HAU0 1116 aa20.56■□□□□ 0.88
ECM1-207ENST00000498579 BLOC1S4Q9NUP1 217 aa20.56■□□□□ 0.88
ECM1-207ENST00000498579 LIMD1Q9UGP4 676 aa20.56■□□□□ 0.88
ECM1-207ENST00000498579 FBXW11Q9UKB1 542 aa20.56■□□□□ 0.88
ECM1-207ENST00000498579 CLUHO75153 1309 aa20.55■□□□□ 0.88
ECM1-207ENST00000498579 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
ECM1-207ENST00000498579 RTL10Q7L3V2 364 aa20.55■□□□□ 0.88
ECM1-207ENST00000498579 HAUS6Q7Z4H7 955 aa20.55■□□□□ 0.88
ECM1-207ENST00000498579 FBXL6Q8N531 539 aa20.55■□□□□ 0.88
ECM1-207ENST00000498579 ASIC4Q96FT7 647 aa20.55■□□□□ 0.88
ECM1-207ENST00000498579 PRKD2Q9BZL6 878 aa20.55■□□□□ 0.88
ECM1-207ENST00000498579 STK17AQ9UEE5 414 aa20.55■□□□□ 0.88
ECM1-207ENST00000498579 MORC2Q9Y6X9 1032 aaPredicted RBP20.55■□□□□ 0.88
ECM1-207ENST00000498579 NPHP3-ACAD11A0A0J9YXS1 232 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 K7ENM7 598 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 PODXLO00592 558 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 RFPL2O75678 378 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 ZMYND10O75800 440 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 HNRNPA1P09651 372 aaKnown RBP eCLIP20.54■□□□□ 0.88
ECM1-207ENST00000498579 HOXA9P31269 272 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 DDIT3P35638 169 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 LIG4P49917 911 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 GRIN1Q05586 938 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 RESTQ13127 1097 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 DHX8Q14562 1220 aaKnown RBP20.54■□□□□ 0.88
ECM1-207ENST00000498579 MCM6Q14566 821 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 PTPAQ15257 358 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 KRI1Q8N9T8 703 aaKnown RBP20.54■□□□□ 0.88
ECM1-207ENST00000498579 CLSTN3Q9BQT9 956 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 MTRRQ9UBK8 725 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 SRPRBQ9Y5M8 271 aaKnown RBP20.54■□□□□ 0.88
ECM1-207ENST00000498579 BACE2Q9Y5Z0 518 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 CLIC4Q9Y696 253 aa20.54■□□□□ 0.88
ECM1-207ENST00000498579 HNRNPDLO14979 420 aaKnown RBP20.53■□□□□ 0.88
ECM1-207ENST00000498579 SYN3O14994 580 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 TRAK2O60296 914 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 CLTAP09496 248 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 SPATA31D3P0C874 917 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 PDIA4P13667 645 aaKnown RBP20.53■□□□□ 0.88
ECM1-207ENST00000498579 RAB33AQ14088 237 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 SPATA31D4Q6ZUB0 917 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 ZNF707Q96C28 371 aaPredicted RBP20.53■□□□□ 0.88
ECM1-207ENST00000498579 ZBTB45Q96K62 511 aaPredicted RBP20.53■□□□□ 0.88
ECM1-207ENST00000498579 TSPAN18Q96SJ8 248 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 GOLGA2P5Q9HBQ8 144 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.53■□□□□ 0.88
ECM1-207ENST00000498579 IGSF9Q9P2J2 1179 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 TBX20Q9UMR3 447 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 NUB1Q9Y5A7 615 aa20.53■□□□□ 0.88
ECM1-207ENST00000498579 TDRD15B5MCY1 1934 aaKnown RBP20.53■□□□□ 0.88
ECM1-207ENST00000498579 XPOTO43592 962 aaKnown RBP20.52■□□□□ 0.88
ECM1-207ENST00000498579 XYLBO75191 536 aa20.52■□□□□ 0.88
ECM1-207ENST00000498579 PIGRP01833 764 aa20.52■□□□□ 0.88
ECM1-207ENST00000498579 POU2F2P09086 479 aa20.52■□□□□ 0.88
ECM1-207ENST00000498579 MARCKSP29966 332 aaPredicted RBP20.52■□□□□ 0.88
ECM1-207ENST00000498579 GBP2P32456 591 aaPredicted RBP20.52■□□□□ 0.88
ECM1-207ENST00000498579 UVSSAQ2YD98 709 aa20.52■□□□□ 0.88
ECM1-207ENST00000498579 PPM1LQ5SGD2 360 aa20.52■□□□□ 0.88
ECM1-207ENST00000498579 NXPE3Q969Y0 559 aa20.52■□□□□ 0.88
ECM1-207ENST00000498579 ZMAT2Q96NC0 199 aaKnown RBP20.52■□□□□ 0.88
ECM1-207ENST00000498579 ZHX3Q9H4I2 956 aa20.52■□□□□ 0.88
ECM1-207ENST00000498579 EPS15L1Q9UBC2 864 aa20.52■□□□□ 0.88
ECM1-207ENST00000498579 FBXO2Q9UK22 296 aaPredicted RBP20.52■□□□□ 0.88
ECM1-207ENST00000498579 STX6O43752 255 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 ASGR2P07307 311 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 C8AP07357 584 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 MYBP10242 640 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 PPP2R3AQ06190 1150 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 SOX4Q06945 474 aaPredicted RBP20.51■□□□□ 0.87
ECM1-207ENST00000498579 TDGQ13569 410 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 SLC10A6Q3KNW5 377 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 C3orf58Q8NDZ4 430 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 SNX21Q969T3 373 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 EPSTI1Q96J88 318 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 MTMR6Q9Y217 621 aa20.51■□□□□ 0.87
ECM1-207ENST00000498579 ZFP37Q9Y6Q3 630 aaPredicted RBP20.51■□□□□ 0.87
ECM1-207ENST00000498579 H7C4K7 107 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 TKTP29401 623 aaKnown RBP20.5■□□□□ 0.87
ECM1-207ENST00000498579 OR1D2P34982 312 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 NUBP1P53384 320 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 RRAGBQ5VZM2 374 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 CD300LGQ6UXG3 332 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 CCDC73Q6ZRK6 1079 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 MAP4K3Q8IVH8 894 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 CD302Q8IX05 232 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 LRRC15Q8TF66 581 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 ST6GALNAC4Q9H4F1 302 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 KCNK12Q9HB15 430 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 UBQLN1Q9UMX0 589 aaKnown RBP20.5■□□□□ 0.87
ECM1-207ENST00000498579 CDY1Q9Y6F8 540 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 TECTAO75443 2155 aa20.5■□□□□ 0.87
ECM1-207ENST00000498579 OGTO15294 1046 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms