RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.62■□□□□ 0.41
NR1H3-227ENST00000498548 TOPORSQ9NS56 1045 aaPredicted RBP17.62■□□□□ 0.41
NR1H3-227ENST00000498548 FNIP2Q9P278 1114 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 CCDC39Q9UFE4 941 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 TBX20Q9UMR3 447 aa17.62■□□□□ 0.41
NR1H3-227ENST00000498548 PDCD11Q14690 1871 aaKnown RBP17.61■□□□□ 0.41
NR1H3-227ENST00000498548 CLDN3O15551 220 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 TNFSF9P41273 254 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 ZNF131P52739 623 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 MCL1Q07820 350 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 SLC39A14Q15043 492 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 PSMD5Q16401 504 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 FOXD4L6Q3SYB3 417 aaPredicted RBP17.61■□□□□ 0.41
NR1H3-227ENST00000498548 ZBTB41Q5SVQ8 909 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 RRAGBQ5VZM2 374 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 LILRA6Q6PI73 481 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 FOXD4L3Q6VB84 417 aaPredicted RBP17.61■□□□□ 0.41
NR1H3-227ENST00000498548 ZPBP2Q6X784 338 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 FIZ1Q96SL8 496 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 LIMD1Q9UGP4 676 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 DENND4AQ7Z401 1863 aa17.61■□□□□ 0.41
NR1H3-227ENST00000498548 A0A087X0B3 334 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 MYMKA6NI61 221 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 H0YCG3 227 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 PODXLO00592 558 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 TBCAO75347 108 aaKnown RBP17.6■□□□□ 0.41
NR1H3-227ENST00000498548 ASGR2P07307 311 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 CXCL8P10145 99 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 KCNE1P15382 129 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 TKTP29401 623 aaKnown RBP17.6■□□□□ 0.41
NR1H3-227ENST00000498548 LIG4P49917 911 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 STK38Q15208 465 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 ZC2HC1CQ53FD0 456 aaPredicted RBP17.6■□□□□ 0.41
NR1H3-227ENST00000498548 HFE2Q6ZVN8 426 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 TDRD5Q8NAT2 981 aaKnown RBP17.6■□□□□ 0.41
NR1H3-227ENST00000498548 KREMEN2Q8NCW0 462 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 PIK3R5Q8WYR1 880 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 UROC1Q96N76 676 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 IKZF4Q9H2S9 585 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 SMOC2Q9H3U7 446 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 CNTN3Q9P232 1028 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 DOCK6Q96HP0 2047 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 TECTAO75443 2155 aa17.6■□□□□ 0.41
NR1H3-227ENST00000498548 TMEM221A6NGB7 291 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 ANKRD63C9JTQ0 380 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 TMEM189-UBE2V1I3L0A0 370 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 M0R296 226 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 FGFR3P22607 806 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 ELAVL2Q12926 359 aaKnown RBP17.59■□□□□ 0.41
NR1H3-227ENST00000498548 PTPN21Q16825 1174 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 SLC39A4Q6P5W5 647 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 RSPO2Q6UXX9 243 aaPredicted RBP17.59■□□□□ 0.41
NR1H3-227ENST00000498548 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.59■□□□□ 0.41
NR1H3-227ENST00000498548 TRIM67Q6ZTA4 783 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 GPR65Q8IYL9 337 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 KRI1Q8N9T8 703 aaKnown RBP17.59■□□□□ 0.41
NR1H3-227ENST00000498548 SMG7Q92540 1137 aaKnown RBP17.59■□□□□ 0.41
NR1H3-227ENST00000498548 SLC38A7Q9NVC3 462 aa17.59■□□□□ 0.41
NR1H3-227ENST00000498548 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
NR1H3-227ENST00000498548 TISP43B9A030 160 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 HNRNPDLO14979 420 aaKnown RBP17.58■□□□□ 0.4
NR1H3-227ENST00000498548 HSP90AA1P07900 732 aaKnown RBP17.58■□□□□ 0.4
NR1H3-227ENST00000498548 OR1D2P34982 312 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 TXLNAP40222 546 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 NASPP49321 788 aaPredicted RBP17.58■□□□□ 0.4
NR1H3-227ENST00000498548 CREMQ03060 361 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 C15orf39Q6ZRI6 1047 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 CCDC149Q6ZUS6 474 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 SV2BQ7L1I2 683 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 SFR1Q86XK3 245 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 PDILTQ8N807 584 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 LINC00301Q8NCQ3 95 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 CMASQ8NFW8 434 aaPredicted RBP17.58■□□□□ 0.4
NR1H3-227ENST00000498548 DDX12PQ92771 950 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 ZNF707Q96C28 371 aaPredicted RBP17.58■□□□□ 0.4
NR1H3-227ENST00000498548 FAM212AQ96EL1 285 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 DDX27Q96GQ7 796 aaKnown RBP17.58■□□□□ 0.4
NR1H3-227ENST00000498548 PLEKHA4Q9H4M7 779 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 PIDD1Q9HB75 910 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 TBC1D7Q9P0N9 293 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 STK17AQ9UEE5 414 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 TUBGCP4Q9UGJ1 667 aa17.58■□□□□ 0.4
NR1H3-227ENST00000498548 LACTBL1A8MY62 500 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 PIGRP01833 764 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 CLTAP09496 248 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 GUCY2FP51841 1108 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 GTF2BQ00403 316 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 ELMSAN1Q6PJG2 1045 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 ZDHHC14Q8IZN3 488 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 HDAC7Q8WUI4 952 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 STAMQ92783 540 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 DNAJC19Q96DA6 116 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 KIF12Q96FN5 646 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 DPP7Q9UHL4 492 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 FBXW11Q9UKB1 542 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 HCN4Q9Y3Q4 1203 aa17.57■□□□□ 0.4
NR1H3-227ENST00000498548 TTC26A0AVF1 554 aa17.56■□□□□ 0.4
NR1H3-227ENST00000498548 SPTLC2O15270 562 aa17.56■□□□□ 0.4
NR1H3-227ENST00000498548 TRAPPC3O43617 180 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms