RNA–Protein interactions for RNA: ENST00000497832.1

RNF25-206, Transcript of ring finger protein 25, human

TSL 3

Gene RNF25, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-206	ENST00000497832	IL17B	Q9UHF5	180 aa		12	□□□□□ -0.49
RNF25-206	ENST00000497832	PCDHB9	Q9Y5E1	797 aa		12	□□□□□ -0.49
RNF25-206	ENST00000497832	ITPR2	Q14571	2701 aa		12	□□□□□ -0.49
RNF25-206	ENST00000497832	USP9Y	O00507	2555 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	ARL5C	A6NH57	179 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	SLC28A2	O43868	658 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	BCKDHB	P21953	392 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	HOXD12	P35452	270 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	CCR2	P41597	374 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	SPIRE1	Q08AE8	756 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	TSHZ3	Q63HK5	1081 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	MIS18BP1	Q6P0N0	1132 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	LRRC69	Q6ZNQ3	347 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	SYT13	Q7L8C5	426 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	PDCD7	Q8N8D1	485 aa	Known RBP	11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	RSPRY1	Q96DX4	576 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	CAMK1G	Q96NX5	476 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	TMEM209	Q96SK2	561 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	AGPAT5	Q9NUQ2	364 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	TMEM74B	Q9NUR3	256 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	DNAAF2	Q9NVR5	837 aa	Known RBP	11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	GTSE1	Q9NYZ3	720 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	MYO16	Q9Y6X6	1858 aa		11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	GOLGA4	Q13439	2230 aa	Known RBP	11.99	□□□□□ -0.49
RNF25-206	ENST00000497832	LRBA	P50851	2863 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	PLXND1	Q9Y4D7	1925 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	NUP210	Q8TEM1	1887 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF25-206	ENST00000497832		A0A087WZ62	844 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	SH3BP5	O60239	455 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	SMARCA5	O60264	1052 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	MOSPD3	O75425	235 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	DKK1	O94907	266 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	IL12RB1	P42701	662 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	TMEM196	Q5HYL7	178 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	UBXN11	Q5T124	520 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	FSTL4	Q6MZW2	842 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	CATSPER4	Q7RTX7	472 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	ZNF410	Q86VK4	478 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	PLEKHM2	Q8IWE5	1019 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	DAGLB	Q8NCG7	672 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	CNNM3	Q8NE01	707 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	KIF2C	Q99661	725 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	CORO1B	Q9BR76	489 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	SEMA4C	Q9C0C4	833 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	MIOS	Q9NXC5	875 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	SLC6A14	Q9UN76	642 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	INVS	Q9Y283	1065 aa		11.98	□□□□□ -0.49
RNF25-206	ENST00000497832	RNF40	O75150	1001 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	TADA2A	O75478	443 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	KIF5B	P33176	963 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	DGKE	P52429	567 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	SERINC3	Q13530	473 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	GRM4	Q14833	912 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	ARHGAP29	Q52LW3	1261 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	TAF1B	Q53T94	588 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	PDZD4	Q76G19	769 aa	Predicted RBP	11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	FMNL3	Q8IVF7	1028 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	GALNT15	Q8N3T1	639 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	MINDY1	Q8N5J2	469 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	TTC8	Q8TAM2	541 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	FAM167A	Q96KS9	214 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	GTPBP2	Q9BX10	602 aa	Known RBP	11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	GPR88	Q9GZN0	384 aa		11.97	□□□□□ -0.49
RNF25-206	ENST00000497832	CEP192	Q8TEP8	1941 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	GJB3	O75712	270 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	LRG1	P02750	347 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	ITGA4	P13612	1032 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	OR1D2	P34982	312 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	MLH1	P40692	756 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	SCNN1G	P51170	649 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	GFPT1	Q06210	699 aa	Predicted RBP	11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	IFIT1B	Q5T764	474 aa	Known RBP	11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	RASSF3	Q86WH2	238 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	NAXD	Q8IW45	347 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	SMG8	Q8ND04	991 aa	Known RBP	11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	CEP76	Q8TAP6	659 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	SPIRE2	Q8WWL2	714 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	GAD1	Q99259	594 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	CAPN10	Q9HC96	672 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	HELLS	Q9NRZ9	838 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	SNTG2	Q9NY99	539 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	ZSWIM5	Q9P217	1185 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	PILRB	Q9UKJ0	227 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	STK24	Q9Y6E0	443 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	GON4L	Q3T8J9	2241 aa		11.96	□□□□□ -0.49
RNF25-206	ENST00000497832	SPDYE3	A6NKU9	549 aa		11.95	□□□□□ -0.5
RNF25-206	ENST00000497832	DDX39A	O00148	427 aa	Known RBP	11.95	□□□□□ -0.5
RNF25-206	ENST00000497832	TRDMT1	O14717	391 aa	Known RBP	11.95	□□□□□ -0.5
RNF25-206	ENST00000497832	DHX15	O43143	795 aa	Known RBP	11.95	□□□□□ -0.5
RNF25-206	ENST00000497832	RRP8	O43159	456 aa	Known RBP	11.95	□□□□□ -0.5
RNF25-206	ENST00000497832	CBFA2T3	O75081	653 aa		11.95	□□□□□ -0.5
RNF25-206	ENST00000497832	SERPINF2	P08697	491 aa		11.95	□□□□□ -0.5
RNF25-206	ENST00000497832	RHD	Q02161	417 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms