RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TRIM43BA6NCK2 446 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 PRR33A8MZF0 331 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 GOLGA6L22H0YM25 854 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 FKTNO75072 461 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 PCDH8O95206 1070 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 NDST3O95803 873 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 NFICP08651 508 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 MUTP22033 750 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 CHMP24386 653 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 PSMA3P25788 255 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 PIK3CAP42336 1068 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 ARFIP2P53365 341 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 ARF3P61204 181 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 ARF1P84077 181 aaKnown RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 CDC42EP1Q00587 391 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 KRT76Q01546 638 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 CHRNDQ07001 517 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 NOMO1Q15155 1222 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 KHDC1Q4VXA5 237 aaKnown RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 SLC9C2Q5TAH2 1124 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 PLBD1Q6P4A8 553 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 B4GALNT4Q76KP1 1039 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 VSIG1Q86XK7 387 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 GALNT13Q8IUC8 556 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 RHOT1Q8IXI2 618 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 RBM12BQ8IXT5 1001 aaKnown RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 GLIS1Q8NBF1 620 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 NLGN2Q8NFZ4 835 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 PLEKHO2Q8TD55 490 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 AFG1LQ8WV93 481 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 KBTBD7Q8WVZ9 684 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 TRIM43Q96BQ3 446 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 ADPGKQ9BRR6 497 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 DUSP23Q9BVJ7 150 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 TRIM54Q9BYV2 358 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 RBM12Q9NTZ6 932 aaKnown RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 FEZ2Q9UHY8 353 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 HERC5Q9UII4 1024 aaKnown RBP6.85□□□□□ -1.31
BRCA1-224ENST00000497488 PCDHA6Q9UN73 950 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 ASB1Q9Y576 335 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 CAPN6Q9Y6Q1 641 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 ABCC8Q09428 1581 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 IFT140Q96RY7 1462 aa6.85□□□□□ -1.31
BRCA1-224ENST00000497488 TDRD9Q8NDG6 1382 aaKnown RBP6.84□□□□□ -1.31
BRCA1-224ENST00000497488 HMX3A6NHT5 357 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 SLC27A2O14975 620 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 ASNA1O43681 348 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 PPP1R11O60927 126 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-224ENST00000497488 PTP4A3O75365 173 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 APOA4P06727 396 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 FLT3LGP49771 235 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 SNX16P57768 344 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 RNASE9P60153 205 aaKnown RBP6.84□□□□□ -1.31
BRCA1-224ENST00000497488 HERVK_113P62684 666 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 SLC6A3Q01959 620 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 ADAM9Q13443 819 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 CUL4BQ13620 913 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 SLC12A1Q13621 1099 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 BECN1Q14457 450 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 UBE3CQ15386 1083 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 SMAD1Q15797 465 aaKnown RBP6.84□□□□□ -1.31
BRCA1-224ENST00000497488 KHDC1LQ5JSQ8 128 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 MROH9Q5TGP6 573 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 NUGGCQ68CJ6 796 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 SLFN12LQ6IEE8 588 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 CDPF1Q6NVV7 123 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 KLHL17Q6TDP4 642 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 SEZ6L2Q6UXD5 910 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 FAM214BQ7L5A3 538 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 DZIP1LQ8IYY4 767 aaKnown RBP6.84□□□□□ -1.31
BRCA1-224ENST00000497488 ARL10Q8N8L6 244 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 HIPK4Q8NE63 616 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 FLCNQ8NFG4 579 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 CREB3L4Q8TEY5 395 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 IPCEF1Q8WWN9 437 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-224ENST00000497488 MAML1Q92585 1016 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 ATP2A3Q93084 1043 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 NSUN4Q96CB9 384 aaKnown RBP6.84□□□□□ -1.31
BRCA1-224ENST00000497488 MRGPRX4Q96LA9 322 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 COG8Q96MW5 612 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 VRK1Q99986 396 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-224ENST00000497488 DBNDD1Q9H9R9 158 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 TDP1Q9NUW8 608 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 USP18Q9UMW8 372 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 RAD54L2Q9Y4B4 1467 aa6.84□□□□□ -1.31
BRCA1-224ENST00000497488 TARBP1Q13395 1621 aaKnown RBP6.83□□□□□ -1.32
BRCA1-224ENST00000497488 TRIM64A6NGJ6 449 aa6.83□□□□□ -1.32
BRCA1-224ENST00000497488 TRIM64BA6NI03 449 aa6.83□□□□□ -1.32
BRCA1-224ENST00000497488 LEFTY1O75610 366 aa6.83□□□□□ -1.32
BRCA1-224ENST00000497488 FSBPO95073 299 aa6.83□□□□□ -1.32
BRCA1-224ENST00000497488 BAG2O95816 211 aa6.83□□□□□ -1.32
BRCA1-224ENST00000497488 FUCA1P04066 466 aa6.83□□□□□ -1.32
BRCA1-224ENST00000497488 ADRB2P07550 413 aa6.83□□□□□ -1.32
BRCA1-224ENST00000497488 ITGA2BP08514 1039 aa6.83□□□□□ -1.32
BRCA1-224ENST00000497488 HNRNPA1P09651 372 aaKnown RBP eCLIP6.83□□□□□ -1.32
BRCA1-224ENST00000497488 GABRB3P28472 473 aa6.83□□□□□ -1.32
BRCA1-224ENST00000497488 GPR15P49685 360 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms