RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 AHRRA9YTQ3 701 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 WNT10BO00744 389 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 ALOX15P16050 662 aaPredicted RBP5.05□□□□□ -1.6
CD46-218ENST00000496723 CCND1P24385 295 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 ZFP36P26651 326 aaKnown RBP5.05□□□□□ -1.6
CD46-218ENST00000496723 SLC6A9P48067 706 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 GPRIN1Q7Z2K8 1008 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 BEND2Q8NDZ0 799 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.05□□□□□ -1.6
CD46-218ENST00000496723 SLC35B2Q8TB61 432 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 TFAP2CQ92754 450 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 TEKT5Q96M29 485 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 C7orf25Q9BPX7 421 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 NDC1Q9BTX1 674 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 SERHL2Q9H4I8 314 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 SYNPO2LQ9H987 977 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 LANCL2Q9NS86 450 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 POGKQ9P215 609 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 SAP30BPQ9UHR5 308 aaKnown RBP5.05□□□□□ -1.6
CD46-218ENST00000496723 AJAP1Q9UKB5 411 aaPredicted RBP5.05□□□□□ -1.6
CD46-218ENST00000496723 SIK3Q9Y2K2 1263 aa5.05□□□□□ -1.6
CD46-218ENST00000496723 CENPVL1A0A0U1RR11 272 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 TMEM200CA6NKL6 621 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 CXorf49A8MYA2 514 aaPredicted RBP5.04□□□□□ -1.6
CD46-218ENST00000496723 RNASET2O00584 256 aaKnown RBP5.04□□□□□ -1.6
CD46-218ENST00000496723 KIAA0355O15063 1070 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 RAP2AP10114 183 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 IL2RBP14784 551 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 NCLP19338 710 aaKnown RBP5.04□□□□□ -1.6
CD46-218ENST00000496723 GUCY1A2P33402 732 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 ZEB1P37275 1124 aaPredicted RBP5.04□□□□□ -1.6
CD46-218ENST00000496723 AVPR1BP47901 424 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 IGBP1P78318 339 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 KRT85P78386 507 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 SP140Q13342 867 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 BMT2Q1RMZ1 405 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 EFCAB2Q5VUJ9 269 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 AFMIDQ63HM1 303 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 EFCAB12Q6NXP0 572 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 Q6YL49 198 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 ARHGEF19Q8IW93 802 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 RHOT1Q8IXI2 618 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 RNF169Q8NCN4 708 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 SUPT20HQ8NEM7 779 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 CCHCR1Q8TD31 782 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 SLC13A1Q9BZW2 595 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 COX11Q9Y6N1 276 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 ATRNL1Q5VV63 1379 aa5.04□□□□□ -1.6
CD46-218ENST00000496723 PJA2O43164 708 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 FPR1P21462 350 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 APOBEC3AP31941 199 aaPredicted RBP5.03□□□□□ -1.6
CD46-218ENST00000496723 PTTG1IPP53801 180 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 SLC16A1P53985 500 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 CLRN1P58418 232 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 KIF23Q02241 960 aaPredicted RBP5.03□□□□□ -1.6
CD46-218ENST00000496723 ODF1Q14990 250 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 COLEC12Q5KU26 742 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 ZKSCAN2Q63HK3 967 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 DRICH1Q6PGQ1 229 aaPredicted RBP5.03□□□□□ -1.6
CD46-218ENST00000496723 OR10H5Q8NGA6 315 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 ZFP28Q8NHY6 868 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 CYFIP2Q96F07 1278 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 COQ10AQ96MF6 247 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 MRI1Q9BV20 369 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 MANSC1Q9H8J5 431 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 MOCS1Q9NZB8 636 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 SPEF1Q9Y4P9 236 aa5.03□□□□□ -1.6
CD46-218ENST00000496723 DIRC3C9JPN6 131 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 LEFTY2O00292 366 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 GPR32O75388 356 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 AMY1AP04745 511 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 SNRPA1P09661 255 aaKnown RBP5.02□□□□□ -1.61
CD46-218ENST00000496723 MGAT1P26572 445 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 PCSK1P29120 753 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 BMPR1AP36894 532 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 WASP42768 502 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 ALDH1A3P47895 512 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 RAP2BP61225 183 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 EXOSC10Q01780 885 aaKnown RBP5.02□□□□□ -1.61
CD46-218ENST00000496723 NHLH2Q02577 135 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 RRP12Q5JTH9 1297 aaKnown RBP5.02□□□□□ -1.61
CD46-218ENST00000496723 ATXN7L2Q5T6C5 722 aaPredicted RBP5.02□□□□□ -1.61
CD46-218ENST00000496723 MIGA2Q7L4E1 593 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 GDF7Q7Z4P5 450 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 SYT12Q8IV01 421 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 LCORLQ8N3X6 602 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 CASKIN2Q8WXE0 1202 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 NAF1Q96HR8 494 aaKnown RBP5.02□□□□□ -1.61
CD46-218ENST00000496723 ZNF768Q9H5H4 540 aaKnown RBP5.02□□□□□ -1.61
CD46-218ENST00000496723 LIMCH1Q9UPQ0 1083 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 PCDHA13Q9Y5I0 950 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 ACTL7AQ9Y615 435 aa5.02□□□□□ -1.61
CD46-218ENST00000496723 PNPLA7Q6ZV29 1317 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 MYBBP1AQ9BQG0 1328 aaKnown RBP5.01□□□□□ -1.61
CD46-218ENST00000496723 HTRA2O43464 458 aaPredicted RBP5.01□□□□□ -1.61
CD46-218ENST00000496723 SNUPNO95149 360 aaKnown RBP5.01□□□□□ -1.61
CD46-218ENST00000496723 ATP5JP18859 108 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 DDCP20711 480 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 BLOC1S1P78537 153 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms