RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 KCNMA1Q12791 1236 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 MAPK7Q13164 816 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 KRT72Q14CN4 511 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 LY6KQ17RY6 165 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 KNOP1Q1ED39 458 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 DEFB115Q30KQ5 88 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 VWA3BQ502W6 1294 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 ALKBH2Q6NS38 261 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 NLRX1Q86UT6 975 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 TRIM50Q86XT4 487 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 ERO1BQ86YB8 467 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 FAM178BQ8IXR5 827 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 SAMD14Q8IZD0 417 aaPredicted RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 SCYL1Q96KG9 808 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 NACC1Q96RE7 527 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 RIT2Q99578 217 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 EIF3CQ99613 913 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 EHMT1Q9H9B1 1298 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 PARVGQ9HBI0 331 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 ZMAT5Q9UDW3 170 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 TCEAL9Q9UHQ7 104 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 LUC7L2Q9Y383 392 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 USP3Q9Y6I4 520 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 TMEM265A0A087WTH1 108 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 SLC16A4O15374 487 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 TMED1Q13445 227 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 MOGSQ13724 837 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 XKR9Q5GH70 373 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 NOL9Q5SY16 702 aaKnown RBP6.64□□□□□ -1.35
SSBP1-213ENST00000496622 FAM102BQ5T8I3 360 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 GJB7Q6PEY0 223 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 TRIM65Q6PJ69 517 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 ZNF720Q7Z2F6 126 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 LCA5Q86VQ0 697 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 ANKRD13CQ8N6S4 541 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 ERP27Q96DN0 273 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 INPP4AQ96PE3 977 aaPredicted RBP6.64□□□□□ -1.35
SSBP1-213ENST00000496622 ZSWIM4Q9H7M6 989 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 TUFT1Q9NNX1 390 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 COL4A3BPQ9Y5P4 624 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 PPP2R3BQ9Y5P8 575 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 RBBP6Q7Z6E9 1792 aaKnown RBP6.64□□□□□ -1.35
SSBP1-213ENST00000496622 A0A0G2JLL6 359 aaPredicted RBP6.64□□□□□ -1.35
SSBP1-213ENST00000496622 ARIH2O95376 493 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 TRIM49P0CI25 452 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 TRIM49CP0CI26 452 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 BCRP11274 1271 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 SLC9A1P19634 815 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 MARK3P27448 753 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 NF2P35240 595 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 PHKA2P46019 1235 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 DNM2P50570 870 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 LRRC63Q05C16 580 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 PKN2Q16513 984 aaKnown RBP6.64□□□□□ -1.35
SSBP1-213ENST00000496622 TBCELQ5QJ74 424 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 TEX35Q5T0J7 233 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 RRAGAQ7L523 313 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 PRRT2Q7Z6L0 340 aaPredicted RBP6.64□□□□□ -1.35
SSBP1-213ENST00000496622 SDCCAG8Q86SQ7 713 aaPredicted RBP6.64□□□□□ -1.35
SSBP1-213ENST00000496622 KIAA1958Q8N8K9 716 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 COPS5Q92905 334 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 RSRC1Q96IZ7 334 aaKnown RBP6.64□□□□□ -1.35
SSBP1-213ENST00000496622 CBWD1Q9BRT8 395 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 PDGFCQ9NRA1 345 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 REXO2Q9Y3B8 237 aaKnown RBP6.64□□□□□ -1.35
SSBP1-213ENST00000496622 PASKQ96RG2 1323 aa6.64□□□□□ -1.35
SSBP1-213ENST00000496622 GOLGA8IPA6NC78 632 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 GOLGA8JA6NMD2 632 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CCDC169A6NNP5 214 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 B3GALNT1O75752 331 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CNMDO75829 334 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 NR3C1P04150 777 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CCND2P30279 289 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ZNF131P52739 623 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 SH3BGRP55822 239 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ACTR2P61160 394 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 GNG11P61952 73 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 PPATQ06203 517 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 KCTD19Q17RG1 926 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 HSDL1Q3SXM5 330 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 USP50Q70EL3 339 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 EPM2AIP1Q7L775 607 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 ALYREFQ86V81 257 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 FBXO16Q8IX29 292 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 PEX5LQ8IYB4 626 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 OR8K1Q8NGG5 319 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 GOLGA5Q8TBA6 731 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 FAM81AQ8TBF8 368 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 BSNDQ8WZ55 320 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CEP170P1Q96L14 293 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 CCDC43Q96MW1 224 aaKnown RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 TSG101Q99816 390 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 OSBPL10Q9BXB5 764 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 PPP1R12CQ9BZL4 782 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 TTYH3Q9C0H2 523 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 EPC1Q9H2F5 836 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 JPH1Q9HDC5 661 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 AASDHPPTQ9NRN7 309 aa6.63□□□□□ -1.35
SSBP1-213ENST00000496622 C6orf203Q9P0P8 240 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-213ENST00000496622 SFMBT1Q9UHJ3 866 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms