RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 RDM1Q8NG50 284 aa13.02□□□□□ -0.33
ATG3-209ENST00000496423 PSPC1Q8WXF1 523 aaKnown RBP13.02□□□□□ -0.33
ATG3-209ENST00000496423 RIT2Q99578 217 aa13.02□□□□□ -0.33
ATG3-209ENST00000496423 TEKT3Q9BXF9 490 aa13.02□□□□□ -0.33
ATG3-209ENST00000496423 CSRNP2Q9H175 543 aa13.02□□□□□ -0.33
ATG3-209ENST00000496423 DUSP15Q9H1R2 295 aaPredicted RBP13.02□□□□□ -0.33
ATG3-209ENST00000496423 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.33
ATG3-209ENST00000496423 TRPV4Q9HBA0 871 aa13.02□□□□□ -0.33
ATG3-209ENST00000496423 COL4A2P08572 1712 aa13.02□□□□□ -0.33
ATG3-209ENST00000496423 DMXL2Q8TDJ6 3036 aa13.02□□□□□ -0.33
ATG3-209ENST00000496423 SLC38A8A6NNN8 435 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 CHMP2AO43633 222 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 CYP21A2P08686 494 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 CLK2P49760 499 aaKnown RBP13.01□□□□□ -0.33
ATG3-209ENST00000496423 SIM1P81133 766 aaPredicted RBP13.01□□□□□ -0.33
ATG3-209ENST00000496423 TUSC3Q13454 348 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 JAKMIP3Q5VZ66 844 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.01□□□□□ -0.33
ATG3-209ENST00000496423 MIER3Q7Z3K6 550 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 FANCBQ8NB91 859 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 HNRNPLLQ8WVV9 542 aaKnown RBP13.01□□□□□ -0.33
ATG3-209ENST00000496423 TCP11Q8WWU5 503 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 LRIG1Q96JA1 1093 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 TMEM87BQ96K49 555 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 ZNF512Q96ME7 567 aaPredicted RBP13.01□□□□□ -0.33
ATG3-209ENST00000496423 IGSF5Q9NSI5 407 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 CACNA2D2Q9NY47 1150 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 SLC12A7Q9Y666 1083 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 ZMYM2Q9UBW7 1377 aa13.01□□□□□ -0.33
ATG3-209ENST00000496423 AKAP13Q12802 2813 aa13□□□□□ -0.33
ATG3-209ENST00000496423 ARHGEF37A1IGU5 675 aa13□□□□□ -0.33
ATG3-209ENST00000496423 HEPACAM2A8MVW5 462 aa13□□□□□ -0.33
ATG3-209ENST00000496423 TK2O00142 265 aa13□□□□□ -0.33
ATG3-209ENST00000496423 DPYSL4O14531 572 aa13□□□□□ -0.33
ATG3-209ENST00000496423 TRAPPC3O43617 180 aa13□□□□□ -0.33
ATG3-209ENST00000496423 EXTL3O43909 919 aa13□□□□□ -0.33
ATG3-209ENST00000496423 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
ATG3-209ENST00000496423 GBP1P32455 592 aa13□□□□□ -0.33
ATG3-209ENST00000496423 VIPR2P41587 438 aa13□□□□□ -0.33
ATG3-209ENST00000496423 CCINQ13939 588 aa13□□□□□ -0.33
ATG3-209ENST00000496423 HNRNPDQ14103 355 aaKnown RBP13□□□□□ -0.33
ATG3-209ENST00000496423 PON2Q15165 354 aa13□□□□□ -0.33
ATG3-209ENST00000496423 ZNF423Q2M1K9 1284 aa13□□□□□ -0.33
ATG3-209ENST00000496423 PRSS36Q5K4E3 855 aa13□□□□□ -0.33
ATG3-209ENST00000496423 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
ATG3-209ENST00000496423 ZNF461Q8TAF7 563 aa13□□□□□ -0.33
ATG3-209ENST00000496423 ZSCAN18Q8TBC5 510 aaPredicted RBP13□□□□□ -0.33
ATG3-209ENST00000496423 HASPINQ8TF76 798 aa13□□□□□ -0.33
ATG3-209ENST00000496423 PRPF31Q8WWY3 499 aaKnown RBP13□□□□□ -0.33
ATG3-209ENST00000496423 RABGGTAQ92696 567 aa13□□□□□ -0.33
ATG3-209ENST00000496423 EXOC4Q96A65 974 aa13□□□□□ -0.33
ATG3-209ENST00000496423 NUSAP1Q9BXS6 441 aaKnown RBP13□□□□□ -0.33
ATG3-209ENST00000496423 EIF2AQ9BY44 585 aaKnown RBP13□□□□□ -0.33
ATG3-209ENST00000496423 SLITRK6Q9H5Y7 841 aa13□□□□□ -0.33
ATG3-209ENST00000496423 SCUBE2Q9NQ36 999 aa13□□□□□ -0.33
ATG3-209ENST00000496423 MTRRQ9UBK8 725 aa13□□□□□ -0.33
ATG3-209ENST00000496423 HES2Q9Y543 173 aa13□□□□□ -0.33
ATG3-209ENST00000496423 PPME1Q9Y570 386 aa13□□□□□ -0.33
ATG3-209ENST00000496423 CDY1Q9Y6F8 540 aa13□□□□□ -0.33
ATG3-209ENST00000496423 ITPR1Q14643 2758 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 CDX4O14627 284 aaPredicted RBP12.99□□□□□ -0.33
ATG3-209ENST00000496423 ADAM12O43184 909 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 CTHP32929 405 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 SCAPQ12770 1279 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 UGCGQ16739 394 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 ARHGAP29Q52LW3 1261 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 ANKS3Q6ZW76 656 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 ZNF605Q86T29 641 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 BBC3Q96PG8 261 aaPredicted RBP12.99□□□□□ -0.33
ATG3-209ENST00000496423 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
ATG3-209ENST00000496423 C2orf42Q9NWW7 574 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 BARHL2Q9NY43 387 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
ATG3-209ENST00000496423 NUP205Q92621 2012 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 ARNTLO00327 626 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 THP07101 528 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 RXRAP19793 462 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 AKAP5P24588 427 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 MCM5P33992 734 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 LIFRP42702 1097 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 SOX9P48436 509 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 AMPD2Q01433 879 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 LAMTOR4Q0VGL1 99 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 GRSF1Q12849 480 aaKnown RBP eCLIP12.98□□□□□ -0.33
ATG3-209ENST00000496423 CYP2U1Q7Z449 544 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 CHCHD4Q8N4Q1 142 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
ATG3-209ENST00000496423 RNF149Q8NC42 400 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
ATG3-209ENST00000496423 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 TCEAL4Q96EI5 215 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 UBL7Q96S82 380 aaPredicted RBP12.98□□□□□ -0.33
ATG3-209ENST00000496423 CEP89Q96ST8 783 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 SH2D3AQ9BRG2 576 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 MINDY3Q9H8M7 445 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 C6orf50Q9HD87 102 aa12.98□□□□□ -0.33
ATG3-209ENST00000496423 HELZ2Q9BYK8 2649 aaKnown RBP12.97□□□□□ -0.33
ATG3-209ENST00000496423 CASTOR2A6NHX0 329 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms