RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PICK1Q9NRD5 415 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 FAIMQ9NVQ4 179 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 PFASO15067 1338 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 EDF1O60869 148 aaKnown RBP9.64□□□□□ -0.87
HPS4-217ENST00000496385 KRT36O76013 467 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 HARSP12081 509 aaKnown RBP9.64□□□□□ -0.87
HPS4-217ENST00000496385 FCER1AP12319 257 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 RAP1GDS1P52306 607 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 RASGRF1Q13972 1273 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 P3H1Q32P28 736 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 SYDE2Q5VT97 1194 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 DSTYKQ6XUX3 929 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 IRF2BP2Q7Z5L9 587 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 EEF2KMTQ96G04 330 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 FAM81BQ96LP2 452 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 FNBP1Q96RU3 617 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 EPB41L4AQ9HCS5 686 aaPredicted RBP9.64□□□□□ -0.87
HPS4-217ENST00000496385 PCDHA3Q9Y5H8 950 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 SYNGAP1Q96PV0 1343 aa9.64□□□□□ -0.87
HPS4-217ENST00000496385 COL1A1P02452 1464 aaPredicted RBP9.64□□□□□ -0.87
HPS4-217ENST00000496385 TMEM247A6NEH6 219 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 NDC80O14777 642 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 NKRFO15226 690 aaKnown RBP eCLIP9.63□□□□□ -0.87
HPS4-217ENST00000496385 DDX3YO15523 660 aaKnown RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 CDH16O75309 829 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 GAS8O95995 478 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 GMPSP49915 693 aaPredicted RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PDCD4Q53EL6 469 aaKnown RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 ZNF449Q6P9G9 518 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 CABP7Q86V35 215 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 NUP93Q8N1F7 819 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 CERS5Q8N5B7 392 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 GDAP1Q8TB36 358 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 SPIRE2Q8WWL2 714 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 CCDC77Q9BR77 488 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 GANQ9H2C0 597 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 RRAGCQ9HB90 399 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 EMILIN3Q9NT22 766 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 UTP6Q9NYH9 597 aaKnown RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 FRMPD4Q14CM0 1322 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 FAM47DPA6NHR8 397 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 TPD52L2O43399 206 aaKnown RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 MAGEC1O60732 1142 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 UQCRFS1P1P0C7P4 283 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PCP11498 1178 aaKnown RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 SCG2P13521 617 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 TXKP42681 527 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 MCAMP43121 646 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 RPL21P46778 160 aaKnown RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 GSTM4Q03013 218 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 ASPHQ12797 758 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PRPF4BQ13523 1007 aaKnown RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 CTC1Q2NKJ3 1217 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 MAP3K21Q5TCX8 1036 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PODNQ7Z5L7 613 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 ZBED8Q8IZ13 594 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 FAM133AQ8N9E0 248 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 ATP11CQ8NB49 1132 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 MCUR1Q96AQ8 359 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 MIPEPQ99797 713 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 GPAMQ9HCL2 828 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 CYLDQ9NQC7 956 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 TMOD4Q9NZQ9 345 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 THEGQ9P2T0 379 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 SCAF8Q9UPN6 1271 aaKnown RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 PCDHAC2Q9Y5I4 1007 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 NCANO14594 1321 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 FLT1P17948 1338 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 GLTPD2A6NH11 291 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 MIF4GDA9UHW6 222 aaKnown RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 GYG2O15488 501 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 CBFA2T3O75081 653 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PRDM1O75626 825 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 CBX6O95503 412 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 EGFRP00533 1210 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PLCG1P19174 1290 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 FGFR4P22455 802 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 CTNNA2P26232 953 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 FOXN2P32314 431 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 HOXD12P35452 270 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 SCNN1DP51172 638 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 AP2B1P63010 937 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 ARHGAP4P98171 946 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 CAV1Q03135 178 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PTK2Q05397 1052 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 MPP2Q14168 576 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 SPARCL1Q14515 664 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 KRT72Q14CN4 511 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PDK4Q16654 411 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 PFKFB3Q16875 520 aaPredicted RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 TAF1BQ53T94 588 aaPredicted RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 C6orf163Q5TEZ5 329 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 FAM91A1Q658Y4 838 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 ZNF571Q7Z3V5 609 aaPredicted RBP9.63□□□□□ -0.87
HPS4-217ENST00000496385 CLNKQ7Z7G1 428 aa9.63□□□□□ -0.87
HPS4-217ENST00000496385 KBTBD2Q8IY47 623 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms