RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 MYCT1Q8N699 235 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 KLHL23Q8NBE8 558 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 SLC5A5Q92911 643 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 FDXACB1Q9BRP7 624 aaPredicted RBP9.22□□□□□ -0.93
VPS13B-206ENST00000496144 KATNBL1Q9H079 304 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 THG1LQ9NWX6 298 aaKnown RBP9.22□□□□□ -0.93
VPS13B-206ENST00000496144 MTCH2Q9Y6C9 303 aa9.22□□□□□ -0.93
VPS13B-206ENST00000496144 RFXAPO00287 272 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 KIF5CO60282 957 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 MED24O75448 989 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 MRPS9P82933 396 aaKnown RBP9.21□□□□□ -0.93
VPS13B-206ENST00000496144 TSPY1Q01534 308 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 ZNF568Q3ZCX4 644 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 FIGNQ5HY92 759 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 TMEM63BQ5T3F8 832 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 LENG9Q96B70 501 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 EIF2AK1Q9BQI3 630 aaKnown RBP9.21□□□□□ -0.93
VPS13B-206ENST00000496144 EHD2Q9NZN4 543 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.21□□□□□ -0.93
VPS13B-206ENST00000496144 NOC2LQ9Y3T9 749 aaKnown RBP9.21□□□□□ -0.93
VPS13B-206ENST00000496144 V9GYY5 206 aaPredicted RBP9.21□□□□□ -0.93
VPS13B-206ENST00000496144 SF3B1O75533 1304 aaKnown RBP eCLIP9.21□□□□□ -0.936e-6■■■■■ 83.1
VPS13B-206ENST00000496144 GSTTP1A0A1W2PQM5 241 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 ZNF197O14709 1029 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 URI1O94763 535 aaPredicted RBP9.21□□□□□ -0.93
VPS13B-206ENST00000496144 TNNC2P02585 160 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 PLA2G4BP0C869 781 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 P4HA1P13674 534 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 CIITAP33076 1130 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 ARHGAP25P42331 645 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.93
VPS13B-206ENST00000496144 CDK17Q00537 523 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 MTMR3Q13615 1198 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 WDR59Q6PJI9 974 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 POTEEQ6S8J3 1075 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 KCNT2Q6UVM3 1135 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 MTSS1LQ765P7 747 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 CCDC65Q8IXS2 484 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 TTC16Q8NEE8 873 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 IMPG2Q9BZV3 1241 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 LZTFL1Q9NQ48 299 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 PRDM6Q9NQX0 595 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 MYO1AQ9UBC5 1043 aa9.21□□□□□ -0.93
VPS13B-206ENST00000496144 E9PMD0 336 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 H3BQ06 376 aaPredicted RBP9.21□□□□□ -0.94
VPS13B-206ENST00000496144 MUTP22033 750 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 MTIF2P46199 727 aaKnown RBP9.21□□□□□ -0.94
VPS13B-206ENST00000496144 EPHB4P54760 987 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 SLFN12LQ6IEE8 588 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 ABHD15Q6UXT9 468 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 LRRC55Q6ZSA7 311 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 TMEM143Q96AN5 459 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 ACAP3Q96P50 834 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 NACA2Q9H009 215 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 FAM53CQ9NYF3 392 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 ANKFY1Q9P2R3 1169 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 VAV3Q9UKW4 847 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 NPHP3-ACAD11A0A0J9YXS1 232 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 NBNO60934 754 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 TADA3O75528 432 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 DARSP14868 501 aaKnown RBP9.21□□□□□ -0.94
VPS13B-206ENST00000496144 KRT9P35527 623 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 SURF1Q15526 300 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 FKBP15Q5T1M5 1219 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 ITIH5Q86UX2 942 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 C4orf19Q8IY42 314 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 KIAA1024Q9UPX6 916 aa9.21□□□□□ -0.94
VPS13B-206ENST00000496144 REXO2Q9Y3B8 237 aaKnown RBP9.21□□□□□ -0.94
VPS13B-206ENST00000496144 FAM86B1E9PN63 330 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 FAM86B2P0C5J1 330 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 H2AFXP16104 143 aaPredicted RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 PAX3P23760 479 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 TUBB2AQ13885 445 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 ZCWPW2Q504Y3 356 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 PADI6Q6TGC4 694 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 KCTD17Q8N5Z5 321 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 OR8K1Q8NGG5 319 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 TUBB2BQ9BVA1 445 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 SIK3Q9Y2K2 1263 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 LUC7L2Q9Y383 392 aaKnown RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 NDUFA10O95299 355 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 COL9A1P20849 921 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 ALDH1A3P47895 512 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 PFKPQ01813 784 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 FBXO38Q6PIJ6 1188 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 C1orf228Q6PIY5 440 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 SMG7Q92540 1137 aaKnown RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 PCDHB2Q9Y5E7 798 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 THP07101 528 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 GHRHRQ02643 423 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 MAN2A1Q16706 1144 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 RSRC2Q7L4I2 434 aaKnown RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 GPBP1Q86WP2 473 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 ECHDC2Q86YB7 292 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 CCDC60Q8IWA6 550 aaPredicted RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 UBALD2Q8IYN6 164 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 FNBP1Q96RU3 617 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 TYW1Q9NV66 732 aaKnown RBP9.2□□□□□ -0.94
VPS13B-206ENST00000496144 IGSF9BQ9UPX0 1349 aa9.2□□□□□ -0.94
VPS13B-206ENST00000496144 PRPF6O94906 941 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms