RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 NSFP46459 744 aaKnown RBP11.85□□□□□ -0.51
CMSS1-208ENST00000496116 ATP1A2P50993 1020 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 EIF3BP55884 814 aaKnown RBP11.85□□□□□ -0.51
CMSS1-208ENST00000496116 ZNF844Q08AG5 666 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 VGLL4Q14135 290 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 CYP1B1Q16678 543 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 LMBRD2Q68DH5 695 aaPredicted RBP11.85□□□□□ -0.51
CMSS1-208ENST00000496116 FOXR1Q6PIV2 292 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 SLC13A5Q86YT5 568 aaPredicted RBP11.85□□□□□ -0.51
CMSS1-208ENST00000496116 CCDC125Q86Z20 511 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 PRELID2Q8N945 189 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 ZNF526Q8TF50 670 aaPredicted RBP11.85□□□□□ -0.51
CMSS1-208ENST00000496116 BTBD6Q96KE9 485 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 MPHOSPH6Q99547 160 aaKnown RBP11.85□□□□□ -0.51
CMSS1-208ENST00000496116 AVENQ9NQS1 362 aaPredicted RBP11.85□□□□□ -0.51
CMSS1-208ENST00000496116 ANAPC7Q9UJX3 599 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 PPME1Q9Y570 386 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 CSADQ9Y600 493 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 SNCAIPQ9Y6H5 919 aa11.85□□□□□ -0.51
CMSS1-208ENST00000496116 FARP2O94887 1054 aaPredicted RBP11.84□□□□□ -0.51
CMSS1-208ENST00000496116 TGFB3P10600 412 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 TBXAS1P24557 533 aaPredicted RBP11.84□□□□□ -0.51
CMSS1-208ENST00000496116 FNTAP49354 379 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 STAT5BP51692 787 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
CMSS1-208ENST00000496116 IFFO1Q0D2I5 559 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 TREML2Q5T2D2 321 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 PPP1R2P3Q6NXS1 205 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 TRIM72Q6ZMU5 477 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 CCDC105Q8IYK2 499 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 MCOLN2Q8IZK6 566 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 CEP89Q96ST8 783 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 CGRRF1Q99675 332 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 ANKFY1Q9P2R3 1169 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 MTRF1LQ9UGC7 380 aaKnown RBP11.84□□□□□ -0.51
CMSS1-208ENST00000496116 ATP8A1Q9Y2Q0 1164 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.84□□□□□ -0.51
CMSS1-208ENST00000496116 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
CMSS1-208ENST00000496116 PTPRFP10586 1907 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 A0A0B4J269 797 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 TULP2O00295 520 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 EDNRBP24530 442 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 PTGIRP43119 386 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 CENPCQ03188 943 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 PDCLQ13371 301 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 CUL2Q13617 745 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 AGBL2Q5U5Z8 902 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 CRELD2Q6UXH1 353 aaPredicted RBP11.84□□□□□ -0.51
CMSS1-208ENST00000496116 NCAPG2Q86XI2 1143 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 OR2W6PQ8NHA6 318 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 MAIP1Q8WWC4 291 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 ELMO3Q96BJ8 720 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 TARS2Q9BW92 718 aaKnown RBP11.84□□□□□ -0.51
CMSS1-208ENST00000496116 FAM129AQ9BZQ8 928 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 IMPG2Q9BZV3 1241 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 SPATC1LQ9H0A9 340 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 AZI2Q9H6S1 392 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 ZDHHC18Q9NUE0 388 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 SNX24Q9Y343 169 aa11.84□□□□□ -0.51
CMSS1-208ENST00000496116 POLR2AP24928 1970 aaKnown RBP11.84□□□□□ -0.51
CMSS1-208ENST00000496116 A0A0G2JMZ2 1700 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 GSTTP1A0A1W2PQM5 241 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 MYO1FO00160 1098 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 EBAG9O00559 213 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 ADCY3O60266 1144 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 ZEB2O60315 1214 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 CYP1A1P04798 512 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 COILP38432 576 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 AP3M2P53677 418 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 PLTPP55058 493 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 FSTL1Q12841 308 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 TARBP2Q15633 366 aaKnown RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 ODF2Q5BJF6 829 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 LIN9Q5TKA1 542 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 TTC19Q6DKK2 380 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 C12orf50Q8NA57 414 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 SEPT1Q8WYJ6 367 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 FAM167AQ96KS9 214 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 FAM107BQ9H098 131 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 TSPYL1Q9H0U9 437 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 BTBD7Q9P203 1132 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 PASKQ96RG2 1323 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 CLDN3O15551 220 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 MAFO75444 373 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 VNN1O95497 513 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 GNA15P30679 374 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 HPDP32754 393 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 TCF7P36402 384 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 EFNA5P52803 228 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 IRX3P78415 501 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 METTL7BQ6UX53 244 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 ZPBP2Q6X784 338 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 HOOK3Q86VS8 718 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 EXOC8Q8IYI6 725 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 FBXO25Q8TCJ0 367 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 CPA5Q8WXQ8 436 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 ZBTB45Q96K62 511 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-208ENST00000496116 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 TXLNGYQ9BZA5 131 aa11.83□□□□□ -0.52
CMSS1-208ENST00000496116 HAPLN2Q9GZV7 340 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms