RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CBWD3Q5JTY5 395 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 CBWD5Q5RIA9 395 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 GDF6Q6KF10 455 aaPredicted RBP17.57■□□□□ 0.4
CBX4-204ENST00000495122 RSRC2Q7L4I2 434 aaKnown RBP17.57■□□□□ 0.4
CBX4-204ENST00000495122 DHX37Q8IY37 1157 aaKnown RBP17.57■□□□□ 0.4
CBX4-204ENST00000495122 LMO3Q8TAP4 145 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 DEPTORQ8TB45 409 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 ATP8B4Q8TF62 1192 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 SMARCAD1Q9H4L7 1026 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 TMEM8AQ9HCN3 771 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 DNAJC12Q9UKB3 198 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 SAR1BQ9Y6B6 198 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 ATG2AQ2TAZ0 1938 aa17.57■□□□□ 0.4
CBX4-204ENST00000495122 RALGAPA2Q2PPJ7 1873 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 A0A0A6YYK5 440 aaPredicted RBP17.56■□□□□ 0.4
CBX4-204ENST00000495122 RCCD1A6NED2 376 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 HAS3O00219 553 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 EXTL3O43909 919 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 IQCF3P0C7M6 154 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 ZNF286BP0CG31 522 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 TRIM49P0CI25 452 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 TRIM49CP0CI26 452 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 ADSSP30520 456 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 LIG4P49917 911 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 CHMP4BP1P59074 171 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 BFSP2Q13515 415 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 PTGISQ16647 500 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 KRT39Q6A163 491 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 ZPBP2Q6X784 338 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 ENOSF1Q7L5Y1 443 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 DEFB128Q7Z7B8 93 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 PARD3BQ8TEW8 1205 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 POMGNT1Q8WZA1 660 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 BICD1Q96G01 975 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 SH2D3AQ9BRG2 576 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 C2orf40Q9H1Z8 148 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 IKZF4Q9H2S9 585 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 PCIF1Q9H4Z3 704 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 GTF2IRD1Q9UHL9 959 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 MSRAQ9UJ68 235 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 NENFQ9UMX5 172 aa17.56■□□□□ 0.4
CBX4-204ENST00000495122 YBX2Q9Y2T7 364 aaKnown RBP17.56■□□□□ 0.4
CBX4-204ENST00000495122 ADGRA3Q8IWK6 1321 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 IGKV6-21A0A0C4DH24 114 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 ZNF233A6NK53 670 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 ANKRD63C9JTQ0 380 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 TCP1P17987 556 aaKnown RBP17.55■□□□□ 0.4
CBX4-204ENST00000495122 GLRA2P23416 452 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 PSEN2P49810 448 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 PTK2Q05397 1052 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 ITIH3Q06033 890 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 GFPT1Q06210 699 aaPredicted RBP17.55■□□□□ 0.4
CBX4-204ENST00000495122 CYP24A1Q07973 514 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 C1orf220Q5T0J3 134 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 CAGE1Q8TC20 777 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 DHX38Q92620 1227 aaKnown RBP17.55■□□□□ 0.4
CBX4-204ENST00000495122 KATNAL1Q9BW62 490 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 PDCL3Q9H2J4 239 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 NKX2-4Q9H2Z4 354 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 TRIM10Q9UDY6 481 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 NOD1Q9Y239 953 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 SLC4A7Q9Y6M7 1214 aa17.55■□□□□ 0.4
CBX4-204ENST00000495122 CTAGE15A4D2H0 777 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 ZBBXA8MT70 800 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 K7ERI5 159 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 ASAP2O43150 1006 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 HBP1O60381 514 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 ABL1P00519 1130 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 CTAGE8P0CG41 777 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 GPC3P51654 580 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 CLDN10P78369 228 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 PPP3CAQ08209 521 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 MFSD10Q14728 455 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 DRAP1Q14919 205 aaPredicted RBP17.54■□□□□ 0.4
CBX4-204ENST00000495122 ELF2Q15723 593 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 HSDL1Q3SXM5 330 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 CDCA2Q69YH5 1023 aaPredicted RBP17.54■□□□□ 0.4
CBX4-204ENST00000495122 SLC39A4Q6P5W5 647 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 TAS1R3Q7RTX0 852 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 ZNF571Q7Z3V5 609 aaPredicted RBP17.54■□□□□ 0.4
CBX4-204ENST00000495122 CTAGE6Q86UF2 777 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 CTAGE4Q8IX94 777 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 GLG1Q92896 1179 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 SPATA33Q96N06 139 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.54■□□□□ 0.4
CBX4-204ENST00000495122 HDAC6Q9UBN7 1215 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 RNF14Q9UBS8 474 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 NAGPAQ9UK23 515 aa17.54■□□□□ 0.4
CBX4-204ENST00000495122 COL1A2P08123 1366 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 A0A087X0T9 212 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 MACROD2A1Z1Q3 448 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 SORBS3O60504 671 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 ADRB2P07550 413 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 FAM228BP0C875 321 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 RABGGTBP53611 331 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 AP3M2P53677 418 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 MFAP3P55082 362 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 POU5F1BQ06416 359 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 TFDP1Q14186 410 aa17.53■□□□□ 0.4
CBX4-204ENST00000495122 PSMD6Q15008 389 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms