RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 GRM5P41594 1212 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 NPTX2P47972 431 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 UPP1Q16831 310 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 UVSSAQ2YD98 709 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 AXDND1Q5T1B0 1012 aaPredicted RBP24.25■■□□□ 1.47
HDDC3-203ENST00000494993 PHLDB3Q6NSJ2 640 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 DAW1Q8N136 415 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 FGF14Q92915 247 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 KIF2CQ99661 725 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 ACO2Q99798 780 aaKnown RBP24.25■■□□□ 1.47
HDDC3-203ENST00000494993 CCDC94Q9BW85 323 aaPredicted RBP24.25■■□□□ 1.47
HDDC3-203ENST00000494993 CDT1Q9H211 546 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 TMEM134Q9H6X4 195 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 POLIQ9UNA4 740 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 DNM3Q9UQ16 869 aa24.25■■□□□ 1.47
HDDC3-203ENST00000494993 SMIM28A0A1B0GU29 152 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 HIP1RO75146 1068 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 TKTP29401 623 aaKnown RBP24.24■■□□□ 1.47
HDDC3-203ENST00000494993 YARSP54577 528 aaKnown RBP24.24■■□□□ 1.47
HDDC3-203ENST00000494993 ZNF568Q3ZCX4 644 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 XKR4Q5GH76 650 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 KRT79Q5XKE5 535 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 PARM1Q6UWI2 310 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 RSPO2Q6UXX9 243 aaPredicted RBP24.24■■□□□ 1.47
HDDC3-203ENST00000494993 C3orf58Q8NDZ4 430 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 FGF13Q92913 245 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 DDX27Q96GQ7 796 aaKnown RBP24.24■■□□□ 1.47
HDDC3-203ENST00000494993 RPP25Q9BUL9 199 aaKnown RBP24.24■■□□□ 1.47
HDDC3-203ENST00000494993 PTPRHQ9HD43 1115 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 TOPORSQ9NS56 1045 aaPredicted RBP24.24■■□□□ 1.47
HDDC3-203ENST00000494993 ARHGAP28Q9P2N2 729 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 BACE2Q9Y5Z0 518 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 CDY1Q9Y6F8 540 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 CACNA1IQ9P0X4 2223 aa24.24■■□□□ 1.47
HDDC3-203ENST00000494993 PP2D1A8MPX8 630 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 LAD1O00515 517 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 TRAPPC3O43617 180 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 BRCC3P46736 316 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 SOX4Q06945 474 aaPredicted RBP24.23■■□□□ 1.47
HDDC3-203ENST00000494993 DMP1Q13316 513 aaPredicted RBP24.23■■□□□ 1.47
HDDC3-203ENST00000494993 ALKAL1Q6UXT8 129 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 ANKS3Q6ZW76 656 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 MTSS1LQ765P7 747 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 TAS1R3Q7RTX0 852 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 ITFG1Q8TB96 612 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 DRC1Q96MC2 740 aa24.23■■□□□ 1.47
HDDC3-203ENST00000494993 MRPL4Q9BYD3 311 aaKnown RBP24.23■■□□□ 1.47
HDDC3-203ENST00000494993 I3L4J1 428 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 PRPHP41219 470 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 OSTNP61366 133 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 MAPK7Q13164 816 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 IL17AQ16552 155 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 RINT1Q6NUQ1 792 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 RTL10Q7L3V2 364 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 RUSC1Q9BVN2 902 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 TARS2Q9BW92 718 aaKnown RBP24.22■■□□□ 1.47
HDDC3-203ENST00000494993 KMT5AQ9NQR1 393 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 HCFC1R1Q9NWW0 138 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 GVINP1Q7Z2Y8 2422 aa24.22■■□□□ 1.47
HDDC3-203ENST00000494993 CDC25AP30304 524 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 GPC5P78333 572 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 C1orf186Q6ZWK4 172 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 KCNK18Q7Z418 384 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 SNX27Q96L92 541 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 MMTAG2Q9BU76 263 aaKnown RBP24.21■■□□□ 1.47
HDDC3-203ENST00000494993 C17orf75Q9HAS0 396 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.21■■□□□ 1.47
HDDC3-203ENST00000494993 SLC38A7Q9NVC3 462 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 DLGAP2Q9P1A6 1054 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 DNMT3BQ9UBC3 853 aaKnown RBP24.21■■□□□ 1.47
HDDC3-203ENST00000494993 SIT1Q9Y3P8 196 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 RBM19Q9Y4C8 960 aaKnown RBP24.21■■□□□ 1.47
HDDC3-203ENST00000494993 PATJQ8NI35 1801 aa24.21■■□□□ 1.47
HDDC3-203ENST00000494993 DCNP07585 359 aaKnown RBP24.2■■□□□ 1.46
HDDC3-203ENST00000494993 MCF2P10911 925 aa24.2■■□□□ 1.46
HDDC3-203ENST00000494993 PROZP22891 400 aa24.2■■□□□ 1.46
HDDC3-203ENST00000494993 PABPC1LQ4VXU2 614 aaKnown RBP24.2■■□□□ 1.46
HDDC3-203ENST00000494993 SPECC1Q5M775 1068 aa24.2■■□□□ 1.46
HDDC3-203ENST00000494993 DTHD1Q6ZMT9 781 aa24.2■■□□□ 1.46
HDDC3-203ENST00000494993 ZMAT2Q96NC0 199 aaKnown RBP24.2■■□□□ 1.46
HDDC3-203ENST00000494993 KCNH3Q9ULD8 1083 aa24.2■■□□□ 1.46
HDDC3-203ENST00000494993 COL4A3Q01955 1670 aa24.2■■□□□ 1.46
HDDC3-203ENST00000494993 PODXLO00592 558 aa24.19■■□□□ 1.46
HDDC3-203ENST00000494993 ABLIM1O14639 778 aa24.19■■□□□ 1.46
HDDC3-203ENST00000494993 KCNE1P15382 129 aa24.19■■□□□ 1.46
HDDC3-203ENST00000494993 STARD6P59095 220 aa24.19■■□□□ 1.46
HDDC3-203ENST00000494993 MPZL3Q6UWV2 235 aa24.19■■□□□ 1.46
HDDC3-203ENST00000494993 NPAS3Q8IXF0 933 aa24.19■■□□□ 1.46
HDDC3-203ENST00000494993 ACAP3Q96P50 834 aa24.19■■□□□ 1.46
HDDC3-203ENST00000494993 TCHPQ9BT92 498 aa24.19■■□□□ 1.46
HDDC3-203ENST00000494993 TIPINQ9BVW5 301 aa24.19■■□□□ 1.46
HDDC3-203ENST00000494993 SLC16A4O15374 487 aa24.18■■□□□ 1.46
HDDC3-203ENST00000494993 ROR1Q01973 937 aa24.18■■□□□ 1.46
HDDC3-203ENST00000494993 VARS2Q5ST30 1063 aaKnown RBP24.18■■□□□ 1.46
HDDC3-203ENST00000494993 SLC8B1Q6J4K2 584 aa24.18■■□□□ 1.46
HDDC3-203ENST00000494993 ADSSL1Q8N142 457 aa24.18■■□□□ 1.46
HDDC3-203ENST00000494993 PJA1Q8NG27 643 aa24.18■■□□□ 1.46
HDDC3-203ENST00000494993 SHDQ96IW2 340 aa24.18■■□□□ 1.46
HDDC3-203ENST00000494993 FOXQ1Q9C009 403 aa24.18■■□□□ 1.46
HDDC3-203ENST00000494993 CNTN3Q9P232 1028 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms