RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 NFX1Q12986 1120 aaKnown RBP11.91□□□□□ -0.5
PKP4-215ENST00000494945 BIRC3Q13489 604 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 LPIN1Q14693 890 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 MEA1Q16626 185 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 SLC10A6Q3KNW5 377 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 C1orf53Q5VUE5 145 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 TDRD10Q5VZ19 366 aaKnown RBP11.91□□□□□ -0.5
PKP4-215ENST00000494945 TWF2Q6IBS0 349 aaKnown RBP11.91□□□□□ -0.5
PKP4-215ENST00000494945 IQCEQ6IPM2 695 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 TRAF7Q6Q0C0 670 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 CYP26C1Q6V0L0 522 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 SLC39A5Q6ZMH5 540 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 RRAGAQ7L523 313 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 ANKRD33Q7Z3H0 272 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 OR5B17Q8NGF7 314 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 TAS1R2Q8TE23 839 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 ANKRD36BP1Q96IX9 119 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 NT5C1BQ96P26 610 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 PADI3Q9ULW8 664 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 C2CD2Q9Y426 696 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 FHOD1Q9Y613 1164 aa11.91□□□□□ -0.5
PKP4-215ENST00000494945 LRRC53A6NM62 1247 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 PHACTR2O75167 634 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 VNN1O95497 513 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 HLA-DRAP01903 254 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 GHRP10912 638 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 SELPP16109 830 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 ZSCAN20P17040 1043 aaPredicted RBP11.9□□□□□ -0.5
PKP4-215ENST00000494945 MSNP26038 577 aaKnown RBP11.9□□□□□ -0.5
PKP4-215ENST00000494945 PIK3CAP42336 1068 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 APBA1Q02410 837 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 SFMBT2Q5VUG0 894 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
PKP4-215ENST00000494945 PHLDB3Q6NSJ2 640 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 LRRC8DQ7L1W4 858 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 ENOSF1Q7L5Y1 443 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 EFCAB13Q8IY85 973 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 HACE1Q8IYU2 909 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 SEMA4DQ92854 862 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 SNX27Q96L92 541 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 TOX2Q96NM4 488 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 SPAG5Q96R06 1193 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 TRAIPQ9BWF2 469 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 STK33Q9BYT3 514 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 MTMR12Q9C0I1 747 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 NXF3Q9H4D5 531 aaKnown RBP11.9□□□□□ -0.5
PKP4-215ENST00000494945 AGO3Q9H9G7 860 aaKnown RBP11.9□□□□□ -0.5
PKP4-215ENST00000494945 C1orf112Q9NSG2 853 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 SNTG2Q9NY99 539 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.9□□□□□ -0.5
PKP4-215ENST00000494945 AIPL1Q9NZN9 384 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 DNAJC12Q9UKB3 198 aa11.9□□□□□ -0.5
PKP4-215ENST00000494945 TSC2P49815 1807 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 DCDC2CA8MYV0 355 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 MEFVO15553 781 aaPredicted RBP11.89□□□□□ -0.51
PKP4-215ENST00000494945 RECQL4O94761 1208 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 NFICP08651 508 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 SKIP12755 728 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 CD52P31358 61 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 STAT1P42224 750 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 RAB27AP51159 221 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 TFAMQ00059 246 aaKnown RBP11.89□□□□□ -0.51
PKP4-215ENST00000494945 NCOA4Q13772 614 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 RAPGEF1Q13905 1077 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 DSC3Q14574 896 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 TMEM132DQ14C87 1099 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 WDR44Q5JSH3 913 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 SMYD5Q6GMV2 418 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 JADE1Q6IE81 842 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 WDR59Q6PJI9 974 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 ALKAL1Q6UXT8 129 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 TRAPPC11Q7Z392 1133 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
PKP4-215ENST00000494945 KIAA1524Q8TCG1 905 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 IMPG2Q9BZV3 1241 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 UBE2TQ9NPD8 197 aaPredicted RBP11.89□□□□□ -0.51
PKP4-215ENST00000494945 PRDM10Q9NQV6 1147 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 FAM105AQ9NUU6 356 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 CNTN3Q9P232 1028 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 PYCARDQ9ULZ3 195 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 IPPQ9Y573 584 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 PCDHB2Q9Y5E7 798 aa11.89□□□□□ -0.51
PKP4-215ENST00000494945 PTPRSQ13332 1948 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 ESPNB1AK53 854 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 F8VZ95 297 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 XPOTO43592 962 aaKnown RBP11.88□□□□□ -0.51
PKP4-215ENST00000494945 PQBP1O60828 265 aaKnown RBP11.88□□□□□ -0.51
PKP4-215ENST00000494945 ZNF623O75123 536 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 PARNO95453 639 aaKnown RBP11.88□□□□□ -0.51
PKP4-215ENST00000494945 ASS1P00966 412 aaKnown RBP11.88□□□□□ -0.51
PKP4-215ENST00000494945 SERPING1P05155 500 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 CCDC172P0C7W6 258 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 FERP16591 822 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 MFAP3P55082 362 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 GCNT1Q02742 428 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 TRPC3Q13507 836 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 ASIC2Q16515 512 aa11.88□□□□□ -0.51
PKP4-215ENST00000494945 SGSM1Q2NKQ1 1148 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms