RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 B3GALT6Q96L58 329 aa15.68■□□□□ 0.1
SCAP-213ENST00000494938 NECAB3Q96P71 396 aaPredicted RBP15.68■□□□□ 0.1
SCAP-213ENST00000494938 KLHL5Q96PQ7 755 aa15.68■□□□□ 0.1
SCAP-213ENST00000494938 ACCSQ96QU6 501 aa15.68■□□□□ 0.1
SCAP-213ENST00000494938 MSTO1Q9BUK6 570 aa15.68■□□□□ 0.1
SCAP-213ENST00000494938 S1PR5Q9H228 398 aa15.68■□□□□ 0.1
SCAP-213ENST00000494938 BLZF1Q9H2G9 400 aa15.68■□□□□ 0.1
SCAP-213ENST00000494938 GOLGA2P5Q9HBQ8 144 aa15.68■□□□□ 0.1
SCAP-213ENST00000494938 RXFP1Q9HBX9 757 aa15.68■□□□□ 0.1
SCAP-213ENST00000494938 CPSF3Q9UKF6 684 aaKnown RBP15.68■□□□□ 0.1
SCAP-213ENST00000494938 A0A1W2PQ27 194 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 A0A1W2PQ64 194 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 A0A1W2PQD8 194 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 PRPF6O94906 941 aaKnown RBP15.67■□□□□ 0.1
SCAP-213ENST00000494938 CXCL8P10145 99 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 HOXD13P35453 343 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 AFMP43652 599 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 NDUFA8P51970 172 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 ASIC1P78348 528 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 EHHADHQ08426 723 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 KYAT1Q16773 422 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 SLFN12LQ6IEE8 588 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 LLGL2Q6P1M3 1020 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 SYCE2Q6PIF2 218 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 TMEM130Q8N3G9 435 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 HASPINQ8TF76 798 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 PYM1Q9BRP8 204 aaKnown RBP15.67■□□□□ 0.1
SCAP-213ENST00000494938 MRPL17Q9NRX2 175 aaKnown RBP15.67■□□□□ 0.1
SCAP-213ENST00000494938 CD207Q9UJ71 328 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 HCFC2Q9Y5Z7 792 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 BRWD1Q9NSI6 2320 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 PLXNA4Q9HCM2 1894 aa15.67■□□□□ 0.1
SCAP-213ENST00000494938 MUC3AQ02505 3323 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 FSD2A1L4K1 749 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 TMEM189-UBE2V1I3L0A0 370 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 C2CD2LO14523 706 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 MBTPS2O43462 519 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 B3GAT3O94766 335 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 IL9P15248 144 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 CA8P35219 290 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 GLUD2P49448 558 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 ACOT2P49753 483 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 SPAG1Q07617 926 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 USP41Q3LFD5 358 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 ANKRD54Q6NXT1 300 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 CRELD2Q6UXH1 353 aaPredicted RBP15.66■□□□□ 0.1
SCAP-213ENST00000494938 UNC13DQ70J99 1090 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 EPM2AIP1Q7L775 607 aaPredicted RBP15.66■□□□□ 0.1
SCAP-213ENST00000494938 GPR65Q8IYL9 337 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 C3orf58Q8NDZ4 430 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 DDX27Q96GQ7 796 aaKnown RBP15.66■□□□□ 0.1
SCAP-213ENST00000494938 UROC1Q96N76 676 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 UHRF1Q96T88 793 aaPredicted RBP15.66■□□□□ 0.1
SCAP-213ENST00000494938 GOLPH3LQ9H4A5 285 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 RPF1Q9H9Y2 349 aaKnown RBP15.66■□□□□ 0.1
SCAP-213ENST00000494938 SLC38A7Q9NVC3 462 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 AGO2Q9UKV8 859 aaKnown RBP15.66■□□□□ 0.1
SCAP-213ENST00000494938 SSX2IPQ9Y2D8 614 aa15.66■□□□□ 0.1
SCAP-213ENST00000494938 CUL9Q8IWT3 2517 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.65■□□□□ 0.1
SCAP-213ENST00000494938 PVALEFA0A1B0GWK0 134 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 TEX28O15482 410 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 KLRC4O43908 158 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 URODP06132 367 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 EPCAMP16422 314 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 RPL9P32969 192 aaKnown RBP15.65■□□□□ 0.1
SCAP-213ENST00000494938 SMAD4Q13485 552 aaKnown RBP15.65■□□□□ 0.1
SCAP-213ENST00000494938 ALCAMQ13740 583 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 POSTNQ15063 836 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 RTP2Q5QGT7 225 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 FAM171A1Q5VUB5 890 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 CEP57L1Q8IYX8 460 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 FSIP1Q8NA03 581 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 SMRP1Q8NCR6 262 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 ZSWIM2Q8NEG5 633 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 ZNF507Q8TCN5 953 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 EMILIN2Q9BXX0 1053 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 USP25Q9UHP3 1055 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 EXOC7Q9UPT5 735 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 BDP1A6H8Y1 2624 aa15.65■□□□□ 0.1
SCAP-213ENST00000494938 SF3B1O75533 1304 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCAP-213ENST00000494938 PODXLO00592 558 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 KLRC2P26717 231 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 SYKP43405 635 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 CLCN4P51793 760 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 POU5F1Q01860 360 aaKnown RBP15.64■□□□□ 0.09
SCAP-213ENST00000494938 SMAD2Q15796 467 aaKnown RBP15.64■□□□□ 0.09
SCAP-213ENST00000494938 TPRNQ4KMQ1 711 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 KIAA1841Q6NSI8 718 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 KANK3Q6NY19 840 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 TMEM87AQ8NBN3 555 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 LNX1Q8TBB1 728 aaPredicted RBP15.64■□□□□ 0.09
SCAP-213ENST00000494938 RIN2Q8WYP3 895 aaPredicted RBP15.64■□□□□ 0.09
SCAP-213ENST00000494938 POMGNT1Q8WZA1 660 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 CASP10Q92851 521 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 KIF12Q96FN5 646 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 TTPALQ9BTX7 342 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 TMEM206Q9H813 350 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 CD320Q9NPF0 282 aa15.64■□□□□ 0.09
SCAP-213ENST00000494938 FNIP2Q9P278 1114 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms