RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 IPO5O00410 1097 aaKnown RBP8.42□□□□□ -1.06
RPGR-210ENST00000494841 MAFGO15525 162 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 MARCH6O60337 910 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 DUSP11O75319 330 aaKnown RBP8.42□□□□□ -1.06
RPGR-210ENST00000494841 TGFB3P10600 412 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 RARBP10826 455 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 IMPDH2P12268 514 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 GCFC2P16383 781 aaKnown RBP8.42□□□□□ -1.06
RPGR-210ENST00000494841 ATF4P18848 351 aaPredicted RBP8.42□□□□□ -1.06
RPGR-210ENST00000494841 TXKP42681 527 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 TRAPPC10P48553 1259 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 NUCB2P80303 420 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 BEX3Q00994 111 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 ARHGAP1Q07960 439 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 SF3A1Q15459 793 aaKnown RBP8.42□□□□□ -1.06
RPGR-210ENST00000494841 CALCRLQ16602 461 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 HSDL1Q3SXM5 330 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 CYP27C1Q4G0S4 372 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 ARSHQ5FYA8 562 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 CELF3Q5SZQ8 465 aaKnown RBP8.42□□□□□ -1.06
RPGR-210ENST00000494841 KCNV1Q6PIU1 500 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 MOXD1Q6UVY6 613 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 TLK2Q86UE8 772 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 OR6J1Q8NGC5 347 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 DNAJB8Q8NHS0 232 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 ETNPPLQ8TBG4 499 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 PPP1R13LQ8WUF5 828 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 AFG1LQ8WV93 481 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 SLC5A5Q92911 643 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 MTMR9Q96QG7 549 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 USP28Q96RU2 1077 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 MLXIPQ9HAP2 919 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 PAK6Q9NQU5 681 aaPredicted RBP8.42□□□□□ -1.06
RPGR-210ENST00000494841 U3KQE9 123 aa8.42□□□□□ -1.06
RPGR-210ENST00000494841 FRMPD3Q5JV73 1810 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 SYNRGQ9UMZ2 1314 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 CTAGE5O15320 804 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 NEMFO60524 1076 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 FARP2O94887 1054 aaPredicted RBP8.41□□□□□ -1.06
RPGR-210ENST00000494841 GH1P01241 217 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 TFRCP02786 760 aaKnown RBP8.41□□□□□ -1.06
RPGR-210ENST00000494841 C6orf222P0C671 652 aaPredicted RBP8.41□□□□□ -1.06
RPGR-210ENST00000494841 SETQ01105 290 aaPredicted RBP8.41□□□□□ -1.06
RPGR-210ENST00000494841 NEDD9Q14511 834 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 IL17AQ16552 155 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 LRCH2Q5VUJ6 765 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 CDCP2Q5VXM1 449 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 CDHR1Q96JP9 859 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 HEXIM2Q96MH2 286 aaKnown RBP8.41□□□□□ -1.06
RPGR-210ENST00000494841 SPATA33Q96N06 139 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 NAP1L4Q99733 375 aaKnown RBP8.41□□□□□ -1.06
RPGR-210ENST00000494841 SENP7Q9BQF6 1050 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 SDF4Q9BRK5 362 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 AP5M1Q9H0R1 490 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 KCNMB3Q9NPA1 279 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 XPNPEP3Q9NQH7 507 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 RNF112Q9ULX5 631 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 WDR81Q562E7 1941 aa8.41□□□□□ -1.06
RPGR-210ENST00000494841 KIAA0100Q14667 2235 aaKnown RBP8.4□□□□□ -1.06
RPGR-210ENST00000494841 GSTTP1A0A1W2PQM5 241 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 NKRFO15226 690 aaKnown RBP eCLIP8.4□□□□□ -1.06
RPGR-210ENST00000494841 CHMP2AO43633 222 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 GAS7O60861 476 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 ADAMTS4O75173 837 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 PSMD10O75832 226 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 BAG4O95429 457 aaKnown RBP8.4□□□□□ -1.06
RPGR-210ENST00000494841 SGPL1O95470 568 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 CCNE2O96020 404 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 GJB1P08034 283 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 OR52Z1P0C646 297 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 FOSL1P15407 271 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 EN2P19622 333 aaPredicted RBP8.4□□□□□ -1.06
RPGR-210ENST00000494841 MARCKSP29966 332 aaPredicted RBP8.4□□□□□ -1.06
RPGR-210ENST00000494841 TECP42680 631 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 GJA9P57773 515 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 PTPAQ15257 358 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 LRRC41Q15345 812 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 UTP14CQ5TAP6 766 aaKnown RBP8.4□□□□□ -1.06
RPGR-210ENST00000494841 FBXW10Q5XX13 1052 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 METTL7BQ6UX53 244 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 NLRC3Q7RTR2 1065 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 SLC43A3Q8NBI5 491 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 RBBP8NLQ8NC74 664 aaPredicted RBP8.4□□□□□ -1.06
RPGR-210ENST00000494841 U2AF1L4Q8WU68 220 aaKnown RBP8.4□□□□□ -1.06
RPGR-210ENST00000494841 ABHD8Q96I13 439 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 FAM20AQ96MK3 541 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 ZNF396Q96N95 335 aaPredicted RBP8.4□□□□□ -1.06
RPGR-210ENST00000494841 GPR20Q99678 358 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 TEKT3Q9BXF9 490 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 UNC45AQ9H3U1 944 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 TTC12Q9H892 705 aaPredicted RBP8.4□□□□□ -1.06
RPGR-210ENST00000494841 TBC1D22BQ9NU19 505 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 CHMP5Q9NZZ3 219 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 SLC9A2Q9UBY0 812 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 PCDHA12Q9UN75 941 aa8.4□□□□□ -1.06
RPGR-210ENST00000494841 NFASCO94856 1347 aa8.39□□□□□ -1.07
RPGR-210ENST00000494841 CCDC85CA6NKD9 419 aa8.39□□□□□ -1.07
RPGR-210ENST00000494841 RBAK-RBAKDNI3L0D1 243 aa8.39□□□□□ -1.07
RPGR-210ENST00000494841 NOP56O00567 594 aaKnown RBP8.39□□□□□ -1.07
RPGR-210ENST00000494841 TBX3O15119 743 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms