RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 TNNI1P19237 187 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 AKAP5P24588 427 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 ITGB8P26012 769 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 RAB27AP51159 221 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 AP3M2P53677 418 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 EXOC3L4Q17RC7 722 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 TCTN1Q2MV58 587 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 FIGNQ5HY92 759 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 TDRD10Q5VZ19 366 aaKnown RBP13.09□□□□□ -0.31
BRD3-206ENST00000494743 LMBRD2Q68DH5 695 aaPredicted RBP13.09□□□□□ -0.31
BRD3-206ENST00000494743 GBP6Q6ZN66 633 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 RTN4RL1Q86UN2 441 aaPredicted RBP13.09□□□□□ -0.31
BRD3-206ENST00000494743 CD302Q8IX05 232 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 DBF4BQ8NFT6 615 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 LMO3Q8TAP4 145 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 APBB2Q92870 758 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 ADAM2Q99965 735 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 CRACR2AQ9BSW2 395 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 FTHL17Q9BXU8 183 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 CXCL16Q9H2A7 254 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
BRD3-206ENST00000494743 MMRN2Q9H8L6 949 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 C2CD2Q9Y426 696 aa13.09□□□□□ -0.31
BRD3-206ENST00000494743 MEIS3P2A8K0S8 358 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 C9IYK1 514 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 EPHB6O15197 1021 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 NOL4O94818 638 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 TIMP1P01033 207 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 GYPCP04921 128 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 KCNE1P15382 129 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 SLC9A1P19634 815 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 PON1P27169 355 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 RFC2P35250 354 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 YARSP54577 528 aaKnown RBP13.08□□□□□ -0.32
BRD3-206ENST00000494743 FAM189BP81408 668 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 JADE1Q6IE81 842 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 TRIM65Q6PJ69 517 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 AGMOQ6ZNB7 445 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
BRD3-206ENST00000494743 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 SPC24Q8NBT2 197 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 TAS1R2Q8TE23 839 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 SEPT8Q92599 483 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 SEMA4DQ92854 862 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 ZMAT2Q96NC0 199 aaKnown RBP13.08□□□□□ -0.32
BRD3-206ENST00000494743 MTMR12Q9C0I1 747 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 INTS2Q9H0H0 1204 aaKnown RBP13.08□□□□□ -0.32
BRD3-206ENST00000494743 SIX2Q9NPC8 291 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 PLCB1Q9NQ66 1216 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 IMPACTQ9P2X3 320 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 DERAQ9Y315 318 aa13.08□□□□□ -0.32
BRD3-206ENST00000494743 LAMA2P24043 3122 aaKnown RBP13.07□□□□□ -0.32
BRD3-206ENST00000494743 VNN1O95497 513 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 SKIP12755 728 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 APBA1Q02410 837 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 CETN1Q12798 172 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 TRIM14Q14142 442 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 TMEM132DQ14C87 1099 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 ZBTB6Q15916 424 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 DUOXA2Q1HG44 320 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 SLC24A5Q71RS6 500 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 NT5DC4Q86YG4 428 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 DRC7Q8IY82 874 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 HACE1Q8IYU2 909 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 C1orf127Q8N9H9 656 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 FBXL13Q8NEE6 735 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 CXorf38Q8TB03 319 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 TSPAN18Q96SJ8 248 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 APOL6Q9BWW8 343 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 LSM14BQ9BX40 385 aaKnown RBP13.07□□□□□ -0.32
BRD3-206ENST00000494743 GANQ9H2C0 597 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 C1orf112Q9NSG2 853 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 RAB20Q9NX57 234 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 FBXL5Q9UKA1 691 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 GIT1Q9Y2X7 761 aa13.07□□□□□ -0.32
BRD3-206ENST00000494743 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.07□□□□□ -0.323e-6■■■■□ 19.9
BRD3-206ENST00000494743 SMIM28A0A1B0GU29 152 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 A0A1W2PQJ5 194 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 RNF225M0QZC1 329 aaPredicted RBP13.06□□□□□ -0.32
BRD3-206ENST00000494743 PTGESO14684 152 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 INPPL1O15357 1258 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 LRRN2O75325 713 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 TMEM191BP0C7N4 346 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 ACTN1P12814 892 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 ITGA4P13612 1032 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 PLA2G5P39877 138 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 TFAMQ00059 246 aaKnown RBP13.06□□□□□ -0.32
BRD3-206ENST00000494743 KLHDC7AQ5VTJ3 777 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 SCARA3Q6AZY7 606 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 MFSD5Q6N075 450 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 TRAPPC11Q7Z392 1133 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 TDHQ8IZJ6 230 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 EHBP1Q8NDI1 1231 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 GSTCDQ8NEC7 633 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 LPPQ93052 612 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 IQCDQ96DY2 449 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 KIF12Q96FN5 646 aa13.06□□□□□ -0.32
BRD3-206ENST00000494743 NUP58Q9BVL2 599 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms