RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 STRN3Q13033 797 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 FAM187BQ17R55 369 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 ARHGAP44Q17R89 818 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 TSHZ1Q6ZSZ6 1077 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 ENOSF1Q7L5Y1 443 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 NT5DC3Q86UY8 548 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 VPS36Q86VN1 386 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 DEPTORQ8TB45 409 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 U2AF1L4Q8WU68 220 aaKnown RBP11.84□□□□□ -0.51
ZIC4-216ENST00000494569 TATDN2Q93075 761 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 C16orf70Q9BSU1 422 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 TARS2Q9BW92 718 aaKnown RBP11.84□□□□□ -0.51
ZIC4-216ENST00000494569 PDE11AQ9HCR9 933 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 SUCLA2Q9P2R7 463 aaPredicted RBP11.84□□□□□ -0.51
ZIC4-216ENST00000494569 COG5Q9UP83 839 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
ZIC4-216ENST00000494569 HBP1O60381 514 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 CCNA1P78396 465 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 LAMC2Q13753 1193 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 SPATA4Q8NEY3 305 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 RFFLQ8WZ73 363 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 AZI2Q9H6S1 392 aa11.84□□□□□ -0.51
ZIC4-216ENST00000494569 AMHR2Q16671 573 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 FAM110CQ1W6H9 321 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 RINLQ6ZS11 566 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 GPR142Q7Z601 462 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 USP37Q86T82 979 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 BRSK2Q8IWQ3 736 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 DHX38Q92620 1227 aaKnown RBP11.83□□□□□ -0.52
ZIC4-216ENST00000494569 CD101Q93033 1021 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 FAM81BQ96LP2 452 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 RNPEPQ9H4A4 650 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 CPSF3Q9UKF6 684 aaKnown RBP11.83□□□□□ -0.52
ZIC4-216ENST00000494569 LRRIQ4A6NIV6 560 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 MEFVO15553 781 aaPredicted RBP11.83□□□□□ -0.52
ZIC4-216ENST00000494569 KIF4AO95239 1232 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 FTCDO95954 541 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 MBTD1Q05BQ5 628 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 ENOX2Q16206 610 aaKnown RBP11.83□□□□□ -0.52
ZIC4-216ENST00000494569 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 MORN1Q5T089 497 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 HDAC7Q8WUI4 952 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 CCDC127Q96BQ5 260 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 MAML3Q96JK9 1138 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 APOBEC3GQ9HC16 384 aaKnown RBP11.83□□□□□ -0.52
ZIC4-216ENST00000494569 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
ZIC4-216ENST00000494569 SYF2O95926 243 aaKnown RBP11.83□□□□□ -0.52
ZIC4-216ENST00000494569 LGALS2P05162 132 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 IFI16Q16666 785 aaKnown RBP11.83□□□□□ -0.52
ZIC4-216ENST00000494569 TAF3Q5VWG9 929 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 SCARA3Q6AZY7 606 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 SLC47A2Q86VL8 602 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 SLC35G2Q8TBE7 412 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 ACTRT1Q8TDG2 376 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 USP6NLQ92738 828 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 CAPZA3Q96KX2 299 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 NT5C1BQ96P26 610 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 C2orf40Q9H1Z8 148 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 EHD2Q9NZN4 543 aa11.83□□□□□ -0.52
ZIC4-216ENST00000494569 RTN2O75298 545 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 TOM1L1O75674 476 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 CYP1A2P05177 515 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 CYP11B1P15538 503 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 PTENP60484 403 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 CDR2Q01850 454 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 CCNI2Q6ZMN8 369 aaPredicted RBP11.82□□□□□ -0.52
ZIC4-216ENST00000494569 RPUSD2Q8IZ73 545 aaKnown RBP11.82□□□□□ -0.52
ZIC4-216ENST00000494569 SH3GL2Q99962 352 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 JPH2Q9BR39 696 aaPredicted RBP11.82□□□□□ -0.52
ZIC4-216ENST00000494569 THAP2Q9H0W7 228 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 IFT122Q9HBG6 1241 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 ADAM21Q9UKJ8 722 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.82□□□□□ -0.52
ZIC4-216ENST00000494569 ADCY6O43306 1168 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 GH1P01241 217 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 IQCF3P0C7M6 154 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 ACOT2P49753 483 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 ZNF132P52740 706 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 C2orf54Q08AI8 447 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 FAM84AQ96KN4 292 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
ZIC4-216ENST00000494569 OSGEPQ9NPF4 335 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 RPS6KL1Q9Y6S9 549 aa11.82□□□□□ -0.52
ZIC4-216ENST00000494569 ASAP2O43150 1006 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 CYP26A1O43174 497 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 HLA-DRAP01903 254 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 UNGP13051 313 aaPredicted RBP11.81□□□□□ -0.52
ZIC4-216ENST00000494569 TNFAIP3P21580 790 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 MARCH8Q5T0T0 291 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 C11orf63Q6NUN7 778 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 NPLOC4Q8TAT6 608 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 BICD1Q96G01 975 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 MSTO1Q9BUK6 570 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 RBAKQ9NYW8 714 aaPredicted RBP11.81□□□□□ -0.52
ZIC4-216ENST00000494569 ERAP1Q9NZ08 941 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 SMARCAL1Q9NZC9 954 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 CCDC66A2RUB6 948 aa11.81□□□□□ -0.52
ZIC4-216ENST00000494569 IGF2BP3O00425 579 aaKnown RBP eCLIP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms