RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CCDC73Q6ZRK6 1079 aa36.29■■■■□ 3.4
CBX4-203ENST00000494546 SV2BQ7L1I2 683 aa36.29■■■■□ 3.4
CBX4-203ENST00000494546 HAPLN2Q9GZV7 340 aa36.29■■■■□ 3.4
CBX4-203ENST00000494546 CNTN3Q9P232 1028 aa36.29■■■■□ 3.4
CBX4-203ENST00000494546 SPTLC2O15270 562 aa36.28■■■■□ 3.4
CBX4-203ENST00000494546 MEFVO15553 781 aaPredicted RBP36.28■■■■□ 3.4
CBX4-203ENST00000494546 SPATA31D3P0C874 917 aa36.28■■■■□ 3.4
CBX4-203ENST00000494546 KCNE1P15382 129 aa36.28■■■■□ 3.4
CBX4-203ENST00000494546 FOXD4L6Q3SYB3 417 aaPredicted RBP36.28■■■■□ 3.4
CBX4-203ENST00000494546 FOXD4L3Q6VB84 417 aaPredicted RBP36.28■■■■□ 3.4
CBX4-203ENST00000494546 SPATA31D4Q6ZUB0 917 aa36.28■■■■□ 3.4
CBX4-203ENST00000494546 DPP7Q9UHL4 492 aa36.28■■■■□ 3.4
CBX4-203ENST00000494546 NR2E1Q9Y466 385 aa36.28■■■■□ 3.4
CBX4-203ENST00000494546 TMEM189-UBE2V1I3L0A0 370 aa36.27■■■■□ 3.4
CBX4-203ENST00000494546 ZSCAN22P10073 491 aaPredicted RBP36.27■■■■□ 3.4
CBX4-203ENST00000494546 PDIA4P13667 645 aaKnown RBP36.27■■■■□ 3.4
CBX4-203ENST00000494546 COL9A1P20849 921 aa36.27■■■■□ 3.4
CBX4-203ENST00000494546 STAT6P42226 847 aa36.27■■■■□ 3.4
CBX4-203ENST00000494546 SLC10A6Q3KNW5 377 aa36.27■■■■□ 3.4
CBX4-203ENST00000494546 GPR149Q86SP6 731 aa36.27■■■■□ 3.4
CBX4-203ENST00000494546 DDX12PQ92771 950 aa36.27■■■■□ 3.4
CBX4-203ENST00000494546 FIZ1Q96SL8 496 aa36.27■■■■□ 3.4
CBX4-203ENST00000494546 TRIP11Q15643 1979 aa36.27■■■■□ 3.4
CBX4-203ENST00000494546 MYMKA6NI61 221 aa36.26■■■■□ 3.4
CBX4-203ENST00000494546 PSMD5Q16401 504 aa36.26■■■■□ 3.4
CBX4-203ENST00000494546 SFR1Q86XK3 245 aa36.26■■■■□ 3.4
CBX4-203ENST00000494546 C3orf58Q8NDZ4 430 aa36.26■■■■□ 3.4
CBX4-203ENST00000494546 PIK3R5Q8WYR1 880 aa36.26■■■■□ 3.4
CBX4-203ENST00000494546 C18orf25Q96B23 403 aaPredicted RBP36.26■■■■□ 3.4
CBX4-203ENST00000494546 DDX27Q96GQ7 796 aaKnown RBP36.26■■■■□ 3.4
CBX4-203ENST00000494546 A0A087X0B3 334 aa36.25■■■■□ 3.39
CBX4-203ENST00000494546 TGM5O43548 720 aa36.25■■■■□ 3.39
CBX4-203ENST00000494546 CXCL8P10145 99 aa36.25■■■■□ 3.39
CBX4-203ENST00000494546 GTF2BQ00403 316 aa36.25■■■■□ 3.39
CBX4-203ENST00000494546 ZC2HC1CQ53FD0 456 aaPredicted RBP36.25■■■■□ 3.39
CBX4-203ENST00000494546 PDZRN4Q6ZMN7 1036 aaPredicted RBP36.25■■■■□ 3.39
CBX4-203ENST00000494546 PDILTQ8N807 584 aa36.25■■■■□ 3.39
CBX4-203ENST00000494546 LNX1Q8TBB1 728 aaPredicted RBP36.25■■■■□ 3.39
CBX4-203ENST00000494546 PLXNA3P51805 1871 aa36.24■■■■□ 3.39
CBX4-203ENST00000494546 PODXLO00592 558 aa36.24■■■■□ 3.39
CBX4-203ENST00000494546 F13A1P00488 732 aa36.24■■■■□ 3.39
CBX4-203ENST00000494546 PIGRP01833 764 aa36.24■■■■□ 3.39
CBX4-203ENST00000494546 CLTAP09496 248 aa36.24■■■■□ 3.39
CBX4-203ENST00000494546 ABCD1P33897 745 aa36.24■■■■□ 3.39
CBX4-203ENST00000494546 CD300LGQ6UXG3 332 aa36.24■■■■□ 3.39
CBX4-203ENST00000494546 C2CD4DB7Z1M9 353 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 I3L4J1 428 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 TRAPPC3O43617 180 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 PPP6R2O75170 966 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 YEATS4O95619 227 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 BRCC3P46736 316 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 PDXDC1Q6P996 788 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 MAP4K3Q8IVH8 894 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 CLSTN3Q9BQT9 956 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 MYH15Q9Y2K3 1946 aa36.23■■■■□ 3.39
CBX4-203ENST00000494546 CCDC195A0A1B0GUA6 201 aa36.22■■■■□ 3.39
CBX4-203ENST00000494546 RFPL2O75678 378 aa36.22■■■■□ 3.39
CBX4-203ENST00000494546 FGFR3P22607 806 aa36.22■■■■□ 3.39
CBX4-203ENST00000494546 TNFSF9P41273 254 aa36.22■■■■□ 3.39
CBX4-203ENST00000494546 C15orf39Q6ZRI6 1047 aa36.22■■■■□ 3.39
CBX4-203ENST00000494546 CMASQ8NFW8 434 aaPredicted RBP36.22■■■■□ 3.39
CBX4-203ENST00000494546 MSTO1Q9BUK6 570 aa36.22■■■■□ 3.39
CBX4-203ENST00000494546 PLEKHA4Q9H4M7 779 aa36.22■■■■□ 3.39
CBX4-203ENST00000494546 CITO14578 2027 aa36.22■■■■□ 3.39
CBX4-203ENST00000494546 C1RP00736 705 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 SPAG1Q07617 926 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 PKP1Q13835 747 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 LILRA6Q6PI73 481 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 KREMEN2Q8NCW0 462 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 HDAC7Q8WUI4 952 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 DNAJC19Q96DA6 116 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 ST6GALNAC4Q9H4F1 302 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 PLEKHA5Q9HAU0 1116 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 RAPGEFL1Q9UHV5 662 aa36.21■■■■□ 3.39
CBX4-203ENST00000494546 OGTO15294 1046 aa36.2■■■■□ 3.39
CBX4-203ENST00000494546 TKTP29401 623 aaKnown RBP36.2■■■■□ 3.39
CBX4-203ENST00000494546 RPL9P32969 192 aaKnown RBP36.2■■■■□ 3.39
CBX4-203ENST00000494546 KYAT1Q16773 422 aa36.2■■■■□ 3.39
CBX4-203ENST00000494546 ZBTB41Q5SVQ8 909 aa36.2■■■■□ 3.39
CBX4-203ENST00000494546 SLC39A4Q6P5W5 647 aa36.2■■■■□ 3.39
CBX4-203ENST00000494546 ZNF720Q7Z2F6 126 aa36.2■■■■□ 3.39
CBX4-203ENST00000494546 TDRD5Q8NAT2 981 aaKnown RBP36.2■■■■□ 3.39
CBX4-203ENST00000494546 MRPL44Q9H9J2 332 aaKnown RBP36.2■■■■□ 3.39
CBX4-203ENST00000494546 TBC1D7Q9P0N9 293 aa36.2■■■■□ 3.39
CBX4-203ENST00000494546 TUBGCP4Q9UGJ1 667 aa36.2■■■■□ 3.39
CBX4-203ENST00000494546 PRR33A8MZF0 331 aa36.19■■■■□ 3.38
CBX4-203ENST00000494546 ADAM12O43184 909 aa36.19■■■■□ 3.38
CBX4-203ENST00000494546 IDEP14735 1019 aa36.19■■■■□ 3.38
CBX4-203ENST00000494546 GAP43P17677 238 aa36.19■■■■□ 3.38
CBX4-203ENST00000494546 PPP2R3AQ06190 1150 aa36.19■■■■□ 3.38
CBX4-203ENST00000494546 CCDC149Q6ZUS6 474 aa36.19■■■■□ 3.38
CBX4-203ENST00000494546 EDAQ92838 391 aa36.19■■■■□ 3.38
CBX4-203ENST00000494546 RPF1Q9H9Y2 349 aaKnown RBP36.19■■■■□ 3.38
CBX4-203ENST00000494546 SEL1LQ9UBV2 794 aa36.19■■■■□ 3.38
CBX4-203ENST00000494546 NUB1Q9Y5A7 615 aa36.19■■■■□ 3.38
CBX4-203ENST00000494546 A0A0B4J269 797 aa36.18■■■■□ 3.38
CBX4-203ENST00000494546 TTC26A0AVF1 554 aa36.18■■■■□ 3.38
CBX4-203ENST00000494546 CUTAO60888 179 aa36.18■■■■□ 3.38
CBX4-203ENST00000494546 KIF12Q96FN5 646 aa36.18■■■■□ 3.38
CBX4-203ENST00000494546 ANKRD63C9JTQ0 380 aa36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms