RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 VTNP04004 478 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 GNAT1P11488 350 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 PRLRP16471 622 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 CHRNB2P17787 502 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 EIF4BP23588 611 aaKnown RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 TNFSF9P41273 254 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 GRM5P41594 1212 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 MAGEA1P43355 309 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 CRYBB1P53674 252 aaPredicted RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 MFAP3P55082 362 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 HADHBP55084 474 aaKnown RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 IGBP1P78318 339 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 BEX3Q00994 111 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 CYP27A1Q02318 531 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 MAP2K1Q02750 393 aaPredicted RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 PTPN11Q06124 597 aaPredicted RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 GFPT1Q06210 699 aaPredicted RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 TRIM32Q13049 653 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 RAPGEF1Q13905 1077 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 SPA17Q15506 151 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 ZBTB6Q15916 424 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 SLC10A6Q3KNW5 377 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 PAPD7Q5XG87 772 aaKnown RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 TAF2Q6P1X5 1199 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 SYT10Q6XYQ8 523 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 RUFY4Q6ZNE9 571 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 CD302Q8IX05 232 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 TXLNBQ8N3L3 684 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 SLC43A3Q8NBI5 491 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 OR5B17Q8NGF7 314 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 UBE2Q2Q8WVN8 375 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 TAF4BQ92750 862 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 TATDN2Q93075 761 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 CCDC127Q96BQ5 260 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 LENG1Q96BZ8 264 aaPredicted RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 NLRP4Q96MN2 994 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 FNBP1Q96RU3 617 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 IFIH1Q9BYX4 1025 aaKnown RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 GCOM2Q9BZD3 368 aaPredicted RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 INO80BQ9C086 356 aaPredicted RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 PLEKHA5Q9HAU0 1116 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 CDHR5Q9HBB8 845 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 APOBEC3GQ9HC16 384 aaKnown RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 HDAC6Q9UBN7 1215 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 GTF2IRD1Q9UHL9 959 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 SALL4Q9UJQ4 1053 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 NOCTQ9UK39 431 aaKnown RBP7.33□□□□□ -1.24
MSH5-217ENST00000494458 DERAQ9Y315 318 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 C2CD2Q9Y426 696 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 PCDHGC5Q9Y5F6 944 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 DUSP10Q9Y6W6 482 aa7.33□□□□□ -1.24
MSH5-217ENST00000494458 EVPLQ92817 2033 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 ANO9A1A5B4 782 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 C17orf102A2RUQ5 167 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 AKR1B10O60218 316 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 KIF5CO60282 957 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 CST3P01034 146 aaPredicted RBP7.32□□□□□ -1.24
MSH5-217ENST00000494458 HMGCRP04035 888 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 STAG3L1P0CL83 205 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 DLATP10515 647 aaKnown RBP7.32□□□□□ -1.24
MSH5-217ENST00000494458 RARBP10826 455 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 CYP2C9P11712 490 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 ZNF132P52740 706 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 GNG11P61952 73 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 MGAT3Q09327 533 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 KIF5AQ12840 1032 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 SNX17Q15036 470 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 DUOXA2Q1HG44 320 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 SGSM1Q2NKQ1 1148 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 ARHGAP29Q52LW3 1261 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 FAM26DQ5JW98 314 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 SCARA3Q6AZY7 606 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 ALKBH5Q6P6C2 394 aaKnown RBP7.32□□□□□ -1.24
MSH5-217ENST00000494458 FAM43BQ6ZT52 329 aaPredicted RBP7.32□□□□□ -1.24
MSH5-217ENST00000494458 TRAPPC11Q7Z392 1133 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 SLFN11Q7Z7L1 901 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 SERINC5Q86VE9 423 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 ZNF677Q86XU0 584 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 EFCAB13Q8IY85 973 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 LNX1Q8TBB1 728 aaPredicted RBP7.32□□□□□ -1.24
MSH5-217ENST00000494458 EPS8L1Q8TE68 723 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 KAT5Q92993 513 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 CALR3Q96L12 384 aaKnown RBP7.32□□□□□ -1.24
MSH5-217ENST00000494458 NT5C1BQ96P26 610 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 AGPAT1Q99943 283 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 TSEN34Q9BSV6 310 aaKnown RBP7.32□□□□□ -1.24
MSH5-217ENST00000494458 TRAIPQ9BWF2 469 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 DNAI1Q9UI46 699 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 SIX4Q9UIU6 781 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 AKT3Q9Y243 479 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 SQORQ9Y6N5 450 aa7.32□□□□□ -1.24
MSH5-217ENST00000494458 LACTBL1A8MY62 500 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 RIOK3O14730 519 aaKnown RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 TRPA1O75762 1119 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 CABYRO75952 493 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 MTA2O94776 668 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 IPO7O95373 1038 aaKnown RBP7.31□□□□□ -1.24
MSH5-217ENST00000494458 MYL3P08590 195 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 CYP11B1P15538 503 aa7.31□□□□□ -1.24
MSH5-217ENST00000494458 TNNI1P19237 187 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms