RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ZNF274Q96GC6 653 aaPredicted RBP9.17□□□□□ -0.94
RIF1-211ENST00000494333 RNF26Q9BY78 433 aaPredicted RBP9.17□□□□□ -0.94
RIF1-211ENST00000494333 TM6SF1Q9BZW5 370 aa9.17□□□□□ -0.94
RIF1-211ENST00000494333 AZI2Q9H6S1 392 aa9.17□□□□□ -0.94
RIF1-211ENST00000494333 CERS4Q9HA82 394 aa9.17□□□□□ -0.94
RIF1-211ENST00000494333 AGO4Q9HCK5 861 aaKnown RBP9.17□□□□□ -0.94
RIF1-211ENST00000494333 NFASCO94856 1347 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 DDX39AO00148 427 aaKnown RBP9.16□□□□□ -0.94
RIF1-211ENST00000494333 CPLX1O14810 134 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 FANCGO15287 622 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 GREM1O60565 184 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 CAND2O75155 1236 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 INSRRP14616 1297 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 ACTR2P61160 394 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 IGBP1P78318 339 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 DEFB103AP81534 67 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 SSRP1Q08945 709 aaKnown RBP9.16□□□□□ -0.94
RIF1-211ENST00000494333 PPFIA1Q13136 1202 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 STK3Q13188 491 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 ITGB3BPQ13352 177 aaPredicted RBP9.16□□□□□ -0.94
RIF1-211ENST00000494333 MAP7Q14244 749 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 MCTP2Q6DN12 878 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 PAOXQ6QHF9 649 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 REXO1Q8N1G1 1221 aaKnown RBP9.16□□□□□ -0.94
RIF1-211ENST00000494333 BICD2Q8TD16 824 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 RASGRP4Q8TDF6 673 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 ISL2Q96A47 359 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 UIMC1Q96RL1 719 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 PCYT2Q99447 389 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 VPS54Q9P1Q0 977 aa9.16□□□□□ -0.94
RIF1-211ENST00000494333 MYH7BA7E2Y1 1941 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 NID2Q14112 1375 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 RFXAPO00287 272 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 IPO5O00410 1097 aaKnown RBP9.15□□□□□ -0.94
RIF1-211ENST00000494333 EFCAB14O75071 495 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 BPNT1O95861 308 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 CENPBP07199 599 aaPredicted RBP9.15□□□□□ -0.94
RIF1-211ENST00000494333 CYP3A4P08684 503 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 TCF3P15923 654 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 FSTP19883 344 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 STAT5BP51692 787 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 NLRP5P59047 1200 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 TAP1Q03518 808 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 PLEKHG4Q58EX7 1191 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 MARCH8Q5T0T0 291 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 TAF2Q6P1X5 1199 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 CPLX2Q6PUV4 134 aaKnown RBP9.15□□□□□ -0.94
RIF1-211ENST00000494333 SEZ6L2Q6UXD5 910 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.15□□□□□ -0.94
RIF1-211ENST00000494333 RUFY4Q6ZNE9 571 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 NIPA1Q7RTP0 329 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 PLPPR4Q7Z2D5 763 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 CCDC148Q8NFR7 591 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 DNAJB3Q8WWF6 145 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 CRYGNQ8WXF5 182 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 SEPT8Q92599 483 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 TNPO1Q92973 898 aaKnown RBP9.15□□□□□ -0.94
RIF1-211ENST00000494333 SSU72Q9NP77 194 aaKnown RBP9.15□□□□□ -0.94
RIF1-211ENST00000494333 SH3GLB2Q9NR46 395 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 TUBE1Q9UJT0 475 aa9.15□□□□□ -0.94
RIF1-211ENST00000494333 IGLV3-22A0A075B6J6 115 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 MBLAC1A4D2B0 266 aaPredicted RBP9.14□□□□□ -0.95
RIF1-211ENST00000494333 RRN3P2A6NIE6 340 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 K7ELQ4 463 aaPredicted RBP9.14□□□□□ -0.95
RIF1-211ENST00000494333 GJB5O95377 273 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 CCNE2O96020 404 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 CHRNA1P02708 482 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 PLCB4Q15147 1175 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 PRR16Q569H4 304 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 RNF43Q68DV7 783 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 SWSAP1Q6NVH7 229 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 ABHD15Q6UXT9 468 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 UBE3DQ7Z6J8 389 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 RPAINQ86UA6 219 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 RSPH3Q86UC2 560 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 MYOCDQ8IZQ8 938 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 USP38Q8NB14 1042 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 ARNTL2Q8WYA1 636 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 ZBTB10Q96DT7 871 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 RAD9AQ99638 391 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 ZNF577Q9BSK1 485 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 SPON2Q9BUD6 331 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 WNT10AQ9GZT5 417 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 TBC1D22BQ9NU19 505 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 PCOLCE2Q9UKZ9 415 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 SCN5AQ14524 2016 aa9.14□□□□□ -0.95
RIF1-211ENST00000494333 COL6A3P12111 3177 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 LAMA2P24043 3122 aaKnown RBP9.13□□□□□ -0.95
RIF1-211ENST00000494333 IGKV6D-21A0A0A0MT36 114 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 LCHNA4D1U4 455 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 DEXIO95424 95 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 IGLV1-40P01703 118 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 AMHP03971 560 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 GHRP10912 638 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 ITGB7P26010 798 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 CIITAP33076 1130 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 SLC26A2P50443 739 aa9.13□□□□□ -0.95
RIF1-211ENST00000494333 ETF1P62495 437 aaKnown RBP9.13□□□□□ -0.95
RIF1-211ENST00000494333 MPP2Q14168 576 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms