RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 EXTL3O43909 919 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 RALAP11233 206 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 MAGOHP61326 146 aaKnown RBP12.35□□□□□ -0.43
COL25A1-204ENST00000494183 SATB1Q01826 763 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 SPARCL1Q14515 664 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 KLHDC7AQ5VTJ3 777 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 MCEEQ96PE7 176 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 EPAS1Q99814 870 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 ELAC2Q9BQ52 826 aaKnown RBP12.35□□□□□ -0.43
COL25A1-204ENST00000494183 AGXT2Q9BYV1 514 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 CHORDC1Q9UHD1 332 aaPredicted RBP12.35□□□□□ -0.43
COL25A1-204ENST00000494183 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
COL25A1-204ENST00000494183 MRFAP1Q9Y605 127 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 ITSN1Q15811 1721 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 SALL1Q9NSC2 1324 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 FAM187AA6NFU0 413 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 SLC1A1P43005 524 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 KCNJ6P48051 423 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 EIF3EP60228 445 aaKnown RBP12.35□□□□□ -0.43
COL25A1-204ENST00000494183 OCRLQ01968 901 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 SREBF2Q12772 1141 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 NAB2Q15742 525 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 GLRA4Q5JXX5 417 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 PDCD7Q8N8D1 485 aaKnown RBP12.35□□□□□ -0.43
COL25A1-204ENST00000494183 CEP120Q8N960 986 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 GMCL1P1Q8NEA9 526 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 NIF3L1Q9GZT8 377 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 KCNF1Q9H3M0 494 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 MROH8Q9H579 483 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 ADAM21Q9UKJ8 722 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 GOLGA8QA0A0J9YX86 632 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 GOLGA8OA6NCC3 632 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 GOLGA8NF8WBI6 632 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 GGCXP38435 758 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 PRAMEP78395 509 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 NOTUMQ6P988 496 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 KDELC2Q7Z4H8 507 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 CBWD2Q8IUF1 395 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 ATL2Q8NHH9 583 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 PPWD1Q96BP3 646 aaKnown RBP12.35□□□□□ -0.43
COL25A1-204ENST00000494183 ASIC4Q96FT7 647 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 FAM163AQ96GL9 167 aaPredicted RBP12.35□□□□□ -0.43
COL25A1-204ENST00000494183 HPDLQ96IR7 371 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 SENP7Q9BQF6 1050 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 LRRC1Q9BTT6 524 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 KBTBD4Q9NVX7 518 aa12.35□□□□□ -0.43
COL25A1-204ENST00000494183 IL18RAPO95256 599 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 MMEP08473 750 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 OR1G1P47890 313 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 GCLCP48506 637 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 CPT1AP50416 773 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 POU5F1BQ06416 359 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 SYCP2LQ5T4T6 812 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 ATG16L1Q676U5 607 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 GPAT2Q6NUI2 795 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 PLEKHH3Q7Z736 793 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 CDKL3Q8IVW4 592 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 AGAP3Q96P47 875 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 ZCCHC17Q9NP64 241 aaKnown RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 SARS2Q9NP81 518 aaKnown RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 KLK14Q9P0G3 267 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 CPA4Q9UI42 421 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 NPTXRO95502 500 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 HSPA4LO95757 839 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 ZFXP17010 805 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 TPI1P60174 286 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 TRIM68Q6AZZ1 485 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 LRGUKQ96M69 825 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 ERGIC2Q96RQ1 377 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 CBWD1Q9BRT8 395 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 GOLPH3Q9H4A6 298 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 SLIT1O75093 1534 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 A0A0G2JND7 137 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 RGL2O15211 777 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 ATMINO43313 823 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 ATP9BO43861 1147 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 HMBSP08397 361 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 BRAFP15056 766 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 CD44P16070 742 aaKnown RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 KLRC1P26715 233 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 GTF2H1P32780 548 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 NPTX2P47972 431 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 CASP4P49662 377 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 SESN2P58004 480 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 KRT17Q04695 432 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 KIZQ2M2Z5 673 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 ITPRIPL1Q6GPH6 555 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 WDR75Q8IWA0 830 aaKnown RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 TRIM62Q9BVG3 475 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 SPATC1LQ9H0A9 340 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 DFFAO00273 331 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 CFLARO15519 480 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 UBA3Q8TBC4 463 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 SCG3Q8WXD2 468 aaKnown RBP12.34□□□□□ -0.43
COL25A1-204ENST00000494183 RMDN1Q96DB5 314 aa12.34□□□□□ -0.43
COL25A1-204ENST00000494183 ZNF512Q96ME7 567 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms