RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 CD1AP06126 327 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 VSIG10L2P0DP72 767 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 TNFAIP2Q03169 654 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 SP140Q13342 867 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 TRIM14Q14142 442 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 USP10Q14694 798 aaKnown RBP7.49□□□□□ -1.21
SMC2-205ENST00000493955 ATP2B3Q16720 1220 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 ZNF572Q7Z3I7 529 aaPredicted RBP7.49□□□□□ -1.21
SMC2-205ENST00000493955 SAPCD2Q86UD0 394 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 LIX1LQ8IVB5 337 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 CCDC33Q8N5R6 958 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 STON2Q8WXE9 905 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 MSLNLQ96KJ4 702 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 GNL3LQ9NVN8 582 aaKnown RBP7.49□□□□□ -1.21
SMC2-205ENST00000493955 MOCS1Q9NZB8 636 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 NTMQ9P121 344 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.49□□□□□ -1.21
SMC2-205ENST00000493955 CPNE7Q9UBL6 633 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 RNF114Q9Y508 228 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 IRAK3Q9Y616 596 aa7.49□□□□□ -1.21
SMC2-205ENST00000493955 MORC2Q9Y6X9 1032 aaPredicted RBP7.49□□□□□ -1.21
SMC2-205ENST00000493955 FGAP02671 866 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 IL6STP40189 918 aaPredicted RBP7.48□□□□□ -1.21
SMC2-205ENST00000493955 SUMO3P55854 103 aaPredicted RBP7.48□□□□□ -1.21
SMC2-205ENST00000493955 BPIFB4P59827 614 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 GAGE13Q4V321 117 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 ZMAT1Q5H9K5 638 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 KRT40Q6A162 431 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 GPR155Q7Z3F1 870 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 SESTD1Q86VW0 696 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 PLXDC1Q8IUK5 500 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 DCBLD1Q8N8Z6 715 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 MDM1Q8TC05 714 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 KBTBD7Q8WVZ9 684 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 COLEC11Q9BWP8 271 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 TMEM168Q9H0V1 697 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 SLC6A15Q9H2J7 730 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 BARX1Q9HBU1 254 aaPredicted RBP7.48□□□□□ -1.21
SMC2-205ENST00000493955 SIDT1Q9NXL6 827 aaKnown RBP7.48□□□□□ -1.21
SMC2-205ENST00000493955 CDC23Q9UJX2 597 aa7.48□□□□□ -1.21
SMC2-205ENST00000493955 RUVBL1Q9Y265 456 aaKnown RBP7.48□□□□□ -1.21
SMC2-205ENST00000493955 NPHP1O15259 732 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 PPFIA4O75335 1185 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 PARP1P09874 1014 aaKnown RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 ZNF888P0CJ79 500 aaPredicted RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 ALOX15P16050 662 aaPredicted RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 CSF2RBP32927 897 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 ALDH1A3P47895 512 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 PIK3CGP48736 1102 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 SOX8P57073 446 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 DLX2Q07687 328 aaPredicted RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 PDCD2Q16342 344 aaPredicted RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 EMC10Q5UCC4 262 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 SYDE1Q6ZW31 735 aaPredicted RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 BRI3BPQ8WY22 251 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 SPATA25Q9BR10 227 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 TRIM54Q9BYV2 358 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 C11orf54Q9H0W9 315 aaPredicted RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 JADE2Q9NQC1 790 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 LUZP4Q9P127 313 aa7.47□□□□□ -1.21
SMC2-205ENST00000493955 AFF4Q9UHB7 1163 aaKnown RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 ARID1BQ8NFD5 2236 aaPredicted RBP7.47□□□□□ -1.21
SMC2-205ENST00000493955 F8W8V4 182 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 FGF18O76093 207 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 AHSGP02765 367 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 CYP1A1P04798 512 aaPredicted RBP7.46□□□□□ -1.21
SMC2-205ENST00000493955 ADCY7P51828 1080 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 ARFIP2P53365 341 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 PMS2P11Q13670 270 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 TUBB8Q3ZCM7 444 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 HIBCHQ6NVY1 386 aaPredicted RBP7.46□□□□□ -1.21
SMC2-205ENST00000493955 USP30Q70CQ3 517 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 CPXCR1Q8N123 301 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 KLHL36Q8N4N3 616 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 NKAPQ8N5F7 415 aaKnown RBP7.46□□□□□ -1.21
SMC2-205ENST00000493955 RNF152Q8N8N0 203 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 ANKRD53Q8N9V6 530 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 KCNN1Q92952 543 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 TNPO1Q92973 898 aaKnown RBP7.46□□□□□ -1.21
SMC2-205ENST00000493955 SCLT1Q96NL6 688 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 P2RX7Q99572 595 aaKnown RBP7.46□□□□□ -1.21
SMC2-205ENST00000493955 UBA5Q9GZZ9 404 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 STK32BQ9NY57 414 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 ADAM29Q9UKF5 820 aa7.46□□□□□ -1.21
SMC2-205ENST00000493955 ATRNL1Q5VV63 1379 aa7.46□□□□□ -1.22
SMC2-205ENST00000493955 WNT10BO00744 389 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 APOL1O14791 398 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 CASRP41180 1078 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 PPM1FP49593 454 aaPredicted RBP7.45□□□□□ -1.22
SMC2-205ENST00000493955 FLT3LGP49771 235 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 MAPK10P53779 464 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 ATP2C1P98194 919 aaPredicted RBP7.45□□□□□ -1.22
SMC2-205ENST00000493955 CREMQ03060 361 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 DACT2Q5SW24 774 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 AFMIDQ63HM1 303 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 CNKSR3Q6P9H4 555 aa7.45□□□□□ -1.22
SMC2-205ENST00000493955 SMAP1Q8IYB5 467 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms