RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 PDE11AQ9HCR9 933 aa8.24□□□□□ -1.09
VEGFA-214ENST00000493786 RNF19AQ9NV58 838 aa8.24□□□□□ -1.09
VEGFA-214ENST00000493786 TBC1D13Q9NVG8 400 aa8.24□□□□□ -1.09
VEGFA-214ENST00000493786 ARMCX3Q9UH62 379 aaPredicted RBP8.24□□□□□ -1.09
VEGFA-214ENST00000493786 UBQLN1Q9UMX0 589 aaKnown RBP8.24□□□□□ -1.09
VEGFA-214ENST00000493786 C2CD2Q9Y426 696 aa8.24□□□□□ -1.09
VEGFA-214ENST00000493786 NFE2L3Q9Y4A8 694 aa8.24□□□□□ -1.09
VEGFA-214ENST00000493786 PCDHB12Q9Y5F1 795 aa8.24□□□□□ -1.09
VEGFA-214ENST00000493786 TTC3P53804 2025 aa8.24□□□□□ -1.09
VEGFA-214ENST00000493786 GOLGA6L19H0YKK7 550 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 PHACTR2O75167 634 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 AKAP3O75969 853 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 CA3P07451 260 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 ADRB2P07550 413 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 NFICP08651 508 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 DNAJB2P25686 324 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 CTNNB1P35222 781 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 PPM1AP35813 382 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 MTIF2P46199 727 aaKnown RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 OR1G1P47890 313 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 CASP4P49662 377 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 ZNF165P49910 485 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 AP3M2P53677 418 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 ENPEPQ07075 957 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 SPAG1Q07617 926 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 BFSP1Q12934 665 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 TUSC3Q13454 348 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 DUOXA2Q1HG44 320 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 LRIT3Q3SXY7 679 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 XKR4Q5GH76 650 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 PPP2R2DQ66LE6 453 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 FAM109BQ6ICB4 259 aaPredicted RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 LRSAM1Q6UWE0 723 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 ALKAL1Q6UXT8 129 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 LRRC55Q6ZSA7 311 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 FRMD5Q7Z6J6 570 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 WDR49Q8IV35 697 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 ZC3H3Q8IXZ2 948 aaKnown RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 AOPEPQ8N6M6 819 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 ZSWIM2Q8NEG5 633 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 ENOX1Q8TC92 643 aaKnown RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 SP7Q8TDD2 431 aaPredicted RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 TMC2Q8TDI7 906 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 TIFAQ96CG3 184 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 EEF2KMTQ96G04 330 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 DDX27Q96GQ7 796 aaKnown RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 MFSD14AQ96MC6 490 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 ZNF558Q96NG5 402 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 SAMD11Q96NU1 681 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 PPP1R10Q96QC0 940 aaKnown RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 TGS1Q96RS0 853 aaKnown RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 CGRRF1Q99675 332 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 DUSP9Q99956 384 aaKnown RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 BPIFA3Q9BQP9 254 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 TMEM175Q9BSA9 504 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 PBX4Q9BYU1 374 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 NKX2-4Q9H2Z4 354 aa8.23□□□□□ -1.09
VEGFA-214ENST00000493786 RC3H2Q9HBD1 1191 aaKnown RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 MRPL42Q9Y6G3 142 aaKnown RBP8.23□□□□□ -1.09
VEGFA-214ENST00000493786 LINC01553A4QN01 128 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 CASTOR2A6NHX0 329 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 PES1O00541 588 aaKnown RBP8.22□□□□□ -1.09
VEGFA-214ENST00000493786 PTGESO14684 152 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 IKBKBO14920 756 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 N4BP1O75113 896 aaKnown RBP8.22□□□□□ -1.09
VEGFA-214ENST00000493786 ALDH2P05091 517 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 KRT19P08727 400 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 MYOGP15173 224 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 CYP3A5P20815 502 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 CDK11BP21127 795 aaKnown RBP8.22□□□□□ -1.09
VEGFA-214ENST00000493786 RPL9P32969 192 aaKnown RBP8.22□□□□□ -1.09
VEGFA-214ENST00000493786 AFF1P51825 1210 aaKnown RBP8.22□□□□□ -1.09
VEGFA-214ENST00000493786 CETN1Q12798 172 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 BIRC3Q13489 604 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 TRPC3Q13507 836 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 ZNF280BQ86YH2 543 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 COLGALT1Q8NBJ5 622 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 FAM200AQ8TCP9 573 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 PARD3BQ8TEW8 1205 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 C18orf25Q96B23 403 aaPredicted RBP8.22□□□□□ -1.09
VEGFA-214ENST00000493786 CNOT6LQ96LI5 555 aaKnown RBP8.22□□□□□ -1.09
VEGFA-214ENST00000493786 ZNF560Q96MR9 790 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 ZMAT2Q96NC0 199 aaKnown RBP8.22□□□□□ -1.09
VEGFA-214ENST00000493786 FUCA2Q9BTY2 467 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 COLEC11Q9BWP8 271 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 MTMR12Q9C0I1 747 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 NRDE2Q9H7Z3 1164 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 MMRN2Q9H8L6 949 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 MIOSQ9NXC5 875 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 DPP3Q9NY33 737 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 STK39Q9UEW8 545 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 ITGA11Q9UKX5 1188 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 PLAGL2Q9UPG8 496 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 FAN1Q9Y2M0 1017 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 PRG3Q9Y2Y8 225 aaPredicted RBP8.22□□□□□ -1.09
VEGFA-214ENST00000493786 NUB1Q9Y5A7 615 aa8.22□□□□□ -1.09
VEGFA-214ENST00000493786 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.22□□□□□ -1.091e-11■□□□□ 9.4
VEGFA-214ENST00000493786 LCHNA4D1U4 455 aa8.21□□□□□ -1.1
VEGFA-214ENST00000493786 LRRIQ3A6PVS8 624 aaPredicted RBP8.21□□□□□ -1.1
VEGFA-214ENST00000493786 KCNJ18B7U540 433 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms