RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 APOBEC3FQ8IUX4 373 aaKnown RBP21.18■□□□□ 0.98
RNF40-203ENST00000493683 APLFQ8IW19 511 aaPredicted RBP21.18■□□□□ 0.98
RNF40-203ENST00000493683 C2orf69Q8N8R5 385 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 C3orf20Q8ND61 904 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 SLC35G2Q8TBE7 412 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 CASS4Q9NQ75 786 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 PDS5AQ29RF7 1337 aaKnown RBP21.18■□□□□ 0.98
RNF40-203ENST00000493683 P4HA2O15460 535 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 DAB1O75553 588 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 CENPCQ03188 943 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 PCYOX1LQ8NBM8 494 aa21.18■□□□□ 0.98
RNF40-203ENST00000493683 PP2D1A8MPX8 630 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 CYP26A1O43174 497 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 SUPT3HO75486 399 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 AIPL1Q9NZN9 384 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 COL15A1P39059 1388 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 FAM95CA0A1B0GW59 222 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 GOLGA8TH3BQL2 631 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 DGAT1O75907 488 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 DAB2P98082 770 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 TRIM28Q13263 835 aaKnown RBP21.17■□□□□ 0.98
RNF40-203ENST00000493683 FASTKD5Q7L8L6 764 aaKnown RBP21.17■□□□□ 0.98
RNF40-203ENST00000493683 MAD2L2Q9UI95 211 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 GFAPP14136 432 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 ANO4Q32M45 955 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 THAP11Q96EK4 314 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 PLEKHA5Q9HAU0 1116 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 UBA6A0AVT1 1052 aaPredicted RBP21.17■□□□□ 0.98
RNF40-203ENST00000493683 NME3Q13232 169 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 TEKT4Q8WW24 435 aa21.17■□□□□ 0.98
RNF40-203ENST00000493683 ASB14A6NK59 587 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 HLA-DPA1P20036 260 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 TRPC1P48995 793 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 ABT1Q9ULW3 272 aaKnown RBP21.16■□□□□ 0.98
RNF40-203ENST00000493683 ADORA2BP29275 332 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 TPI1P60174 286 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 NDFIP2Q9NV92 336 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 ATICP31939 592 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 GALCP54803 685 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 IRX1P78414 480 aaPredicted RBP21.16■□□□□ 0.98
RNF40-203ENST00000493683 ZNF200P98182 395 aaPredicted RBP21.16■□□□□ 0.98
RNF40-203ENST00000493683 GRIN1Q05586 938 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 TAS2R42Q7RTR8 314 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 EFL1Q7Z2Z2 1120 aaKnown RBP21.16■□□□□ 0.98
RNF40-203ENST00000493683 ZNF677Q86XU0 584 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 MMGT1Q8N4V1 131 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 PGBD4Q96DM1 585 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 MKNK1Q9BUB5 465 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 HSPBP1Q9NZL4 362 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 ZC3H7BQ9UGR2 993 aaKnown RBP21.16■□□□□ 0.98
RNF40-203ENST00000493683 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 TMEM253P0C7T8 217 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 YWHABP31946 246 aaKnown RBP21.16■□□□□ 0.98
RNF40-203ENST00000493683 FMO5P49326 533 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 ALDH18A1P54886 795 aaKnown RBP21.16■□□□□ 0.98
RNF40-203ENST00000493683 LONP2Q86WA8 852 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 NR1H4Q96RI1 486 aaPredicted RBP21.16■□□□□ 0.98
RNF40-203ENST00000493683 PAK5Q9P286 719 aa21.16■□□□□ 0.98
RNF40-203ENST00000493683 KCNN4O15554 427 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 ANKS3Q6ZW76 656 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 SEPT12Q8IYM1 358 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 AFG1LQ8WV93 481 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 KIF12Q96FN5 646 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 MED15Q96RN5 788 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 SLC24A3Q9HC58 644 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 NEU2Q9Y3R4 380 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 EIF3DO15371 548 aaKnown RBP eCLIP21.15■□□□□ 0.98
RNF40-203ENST00000493683 ECE2O60344 883 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 ENO1P06733 434 aaKnown RBP21.15■□□□□ 0.98
RNF40-203ENST00000493683 UCHL3P15374 230 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 TRIM60Q495X7 471 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 ARL8AQ96BM9 186 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 CFAP65Q6ZU64 1925 aaKnown RBP21.15■□□□□ 0.98
RNF40-203ENST00000493683 NEMP1O14524 444 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 MTF1Q14872 753 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 TAGAPQ8N103 731 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 TBC1D19Q8N5T2 526 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.15■□□□□ 0.98
RNF40-203ENST00000493683 FOXN1O15353 648 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 SBK1Q52WX2 424 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 CYFIP1Q7L576 1253 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 CALML6Q8TD86 181 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 PLA2G12BQ9BX93 195 aa21.15■□□□□ 0.98
RNF40-203ENST00000493683 GPSM2P81274 684 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 AASDHQ4L235 1098 aaPredicted RBP21.14■□□□□ 0.98
RNF40-203ENST00000493683 C12orf60Q5U649 245 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 TRPM8Q7Z2W7 1104 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 EPC1Q9H2F5 836 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 CPVLQ9H3G5 476 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 AURKCQ9UQB9 309 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 ARHGEF40Q8TER5 1519 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 CYP27B1O15528 508 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 HMOX2P30519 316 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 XKR3Q5GH77 459 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 HNRNPLLQ8WVV9 542 aaKnown RBP21.14■□□□□ 0.98
RNF40-203ENST00000493683 ANKRD7Q92527 254 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 SEC16BQ96JE7 1060 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 ISCUQ9H1K1 167 aa21.14■□□□□ 0.98
RNF40-203ENST00000493683 DNAJC6O75061 913 aa21.14■□□□□ 0.97
RNF40-203ENST00000493683 RBP5P82980 135 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms