RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 SLC11A1P49279 550 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 DLG4P78352 724 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 ANO6Q4KMQ2 910 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 C1orf220Q5T0J3 134 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 IRF2BP1Q8IU81 584 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 CD302Q8IX05 232 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 FAM186BQ8IYM0 893 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 CSGALNACT2Q8N6G5 542 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 COLGALT1Q8NBJ5 622 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 BCL7CQ8WUZ0 217 aaPredicted RBP13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 RSPH1Q8WYR4 309 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 RABGGTAQ92696 567 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 CLP1Q92989 425 aaKnown RBP13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 TIFAQ96CG3 184 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 LRCH3Q96II8 777 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 POP1Q99575 1024 aaKnown RBP13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 PAAF1Q9BRP4 392 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 C17orf80Q9BSJ5 609 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 SRRTQ9BXP5 876 aaKnown RBP13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 ASB7Q9H672 318 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 DACH1Q9UI36 760 aa13.14□□□□□ -0.31
RHBDF1-211ENST00000493647 CASTOR2A6NHX0 329 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 LRRIQ3A6PVS8 624 aaPredicted RBP13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 SLC16A3O15427 465 aaKnown RBP13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 ZC3H11AO75152 810 aaKnown RBP eCLIP13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 GALTP07902 379 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 CCDC192P0DO97 292 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 PSMC2P35998 433 aaKnown RBP13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 BCAR1P56945 870 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 MCCD1P59942 119 aaPredicted RBP13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 RNASELQ05823 741 aaKnown RBP13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 TUSC3Q13454 348 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 TMEM132DQ14C87 1099 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 TMEM173Q86WV6 379 aaPredicted RBP13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 OR5B17Q8NGF7 314 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 PARD3BQ8TEW8 1205 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 ZNF516Q92618 1163 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 CCDC127Q96BQ5 260 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 CEP63Q96MT8 703 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 CGRRF1Q99675 332 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 MKNK1Q9BUB5 465 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 FRMD4BQ9Y2L6 1034 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 DERAQ9Y315 318 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 C2CD2Q9Y426 696 aa13.13□□□□□ -0.31
RHBDF1-211ENST00000493647 GBF1Q92538 1859 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 EPOPA6NHQ4 379 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 NT5C1B-RDH14C9J2C7 533 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 PPEF2O14830 753 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 DLATP10515 647 aaKnown RBP13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 EPB41P11171 864 aaKnown RBP13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 LAG3P18627 525 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 BMPR1AP36894 532 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 ERVK-21P61565 698 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 SPATA1Q5VX52 437 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 KCNT2Q6UVM3 1135 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 CD300LGQ6UXG3 332 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 SLC39A11Q8N1S5 342 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 CXorf38Q8TB03 319 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 TSPAN18Q96SJ8 248 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 TMEM175Q9BSA9 504 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 MTMR12Q9C0I1 747 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 CERS4Q9HA82 394 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 INTS13Q9NVM9 706 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 MARCH5Q9NX47 278 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 MTUS1Q9ULD2 1270 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 UBQLN1Q9UMX0 589 aaKnown RBP13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 PRG3Q9Y2Y8 225 aaPredicted RBP13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 RALGAPA2Q2PPJ7 1873 aa13.12□□□□□ -0.31
RHBDF1-211ENST00000493647 NRP1O14786 923 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 ITGB1P05556 798 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 TRIM49P0CI25 452 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 TRIM49CP0CI26 452 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 CYP3A5P20815 502 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 LRPAP1P30533 357 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 CTNNB1P35222 781 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 OR1G1P47890 313 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 VAMP7P51809 220 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 CLDN10P78369 228 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 TFAMQ00059 246 aaKnown RBP13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 BFSP1Q12934 665 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 HSP90AA2PQ14568 343 aaPredicted RBP13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 NCAPHQ15003 741 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 SURF1Q15526 300 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 EPC2Q52LR7 807 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 SPOUT1Q5T280 376 aaKnown RBP13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 INTS8Q75QN2 995 aaKnown RBP13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 WDR49Q8IV35 697 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 C3orf58Q8NDZ4 430 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 BEST2Q8NFU1 509 aa13.11□□□□□ -0.31
RHBDF1-211ENST00000493647 ZNF558Q96NG5 402 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms