RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 C17orf99Q6UX52 265 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 GADL1Q6ZQY3 521 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 UBE2Q1Q7Z7E8 422 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 ADGRE4PQ86SQ3 457 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 SGMS1Q86VZ5 419 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 ZNF227Q86WZ6 799 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 GIPC2Q8TF65 315 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 SHDQ96IW2 340 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 BABAM1Q9NWV8 329 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 MTMR10Q9NXD2 777 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 NPFFR2Q9Y5X5 522 aa5.42□□□□□ -1.54
CLIP4-212ENST00000493551 ECM29Q5VYK3 1845 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 FRAT2O75474 233 aaPredicted RBP5.41□□□□□ -1.54
CLIP4-212ENST00000493551 SGPL1O95470 568 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 HOXD10P28358 340 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 FLT3LGP49771 235 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 GFRA1P56159 465 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 KRTAP10-11P60412 298 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 RACK1P63244 317 aaKnown RBP5.41□□□□□ -1.54
CLIP4-212ENST00000493551 KSR2Q6VAB6 950 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 ERO1BQ86YB8 467 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 RBM12BQ8IXT5 1001 aaKnown RBP5.41□□□□□ -1.54
CLIP4-212ENST00000493551 RPUSD2Q8IZ73 545 aaKnown RBP5.41□□□□□ -1.54
CLIP4-212ENST00000493551 UHMK1Q8TAS1 419 aaKnown RBP5.41□□□□□ -1.54
CLIP4-212ENST00000493551 RUNDC1Q96C34 613 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 JAM3Q9BX67 310 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 NELFAQ9H3P2 528 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 CNNM1Q9NRU3 951 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 DDX41Q9UJV9 622 aaKnown RBP5.41□□□□□ -1.54
CLIP4-212ENST00000493551 STXBP5LQ9Y2K9 1186 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 SZT2Q5T011 3432 aa5.41□□□□□ -1.54
CLIP4-212ENST00000493551 APAF1O14727 1248 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 TNPO2O14787 897 aaKnown RBP5.4□□□□□ -1.54
CLIP4-212ENST00000493551 HOXB7P09629 217 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 IL1R1P14778 569 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 PAK2Q13177 524 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 IFIT5Q13325 482 aaKnown RBP5.4□□□□□ -1.54
CLIP4-212ENST00000493551 PPIL2Q13356 520 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 GCKRQ14397 625 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 SF1Q15637 639 aaKnown RBP5.4□□□□□ -1.54
CLIP4-212ENST00000493551 EPHA10Q5JZY3 1008 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 CCDC30Q5VVM6 783 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 DENND5AQ6IQ26 1287 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 LMBR1LQ6UX01 489 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 OTOP3Q7RTS5 596 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 TMEM145Q8NBT3 493 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 CFHR4Q92496 578 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 PUS3Q9BZE2 481 aaKnown RBP5.4□□□□□ -1.54
CLIP4-212ENST00000493551 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.4□□□□□ -1.54
CLIP4-212ENST00000493551 TMOD2Q9NZR1 351 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 PTGFRNQ9P2B2 879 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 LRP2BPQ9P2M1 347 aa5.4□□□□□ -1.54
CLIP4-212ENST00000493551 RPTORQ8N122 1335 aa5.4□□□□□ -1.55
CLIP4-212ENST00000493551 ADGRA2Q96PE1 1338 aa5.4□□□□□ -1.55
CLIP4-212ENST00000493551 MYH3P11055 1940 aa5.4□□□□□ -1.55
CLIP4-212ENST00000493551 ARAP2Q8WZ64 1704 aa5.4□□□□□ -1.55
CLIP4-212ENST00000493551 LAMB1P07942 1786 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 ALPK3Q96L96 1907 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 KRTAP29-1A8MX34 341 aaPredicted RBP5.39□□□□□ -1.55
CLIP4-212ENST00000493551 CAPN14A8MX76 684 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 LTFP02788 710 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 PRMT2P55345 433 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 GRM7Q14831 915 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 TBR1Q16650 682 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 LDHAL6AQ6ZMR3 332 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 USP30Q70CQ3 517 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 NECAB2Q7Z6G3 386 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.39□□□□□ -1.55
CLIP4-212ENST00000493551 ANKRD23Q86SG2 305 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 VPS37DQ86XT2 251 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 TDHQ8IZJ6 230 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 ANKRD13CQ8N6S4 541 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 RASGRP4Q8TDF6 673 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 SMCR8Q8TEV9 937 aaPredicted RBP5.39□□□□□ -1.55
CLIP4-212ENST00000493551 TEKT1Q969V4 418 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 ZNF764Q96H86 408 aaPredicted RBP5.39□□□□□ -1.55
CLIP4-212ENST00000493551 GUCD1Q96NT3 240 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 PARK7Q99497 189 aaKnown RBP5.39□□□□□ -1.55
CLIP4-212ENST00000493551 GDF15Q99988 308 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 STK31Q9BXU1 1019 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 CEP290O15078 2479 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 A0A1B0GUL6 1792 aa5.39□□□□□ -1.55
CLIP4-212ENST00000493551 UNCXA6NJT0 531 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 TRIM75PA6NK02 468 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 RHOBTB3O94955 611 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 NUDT3O95989 172 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 HMGCRP04035 888 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 GNAI1P63096 354 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 MOGSQ13724 837 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 CCDC27Q2M243 656 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 CCDC57Q2TAC2 916 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 SV2CQ496J9 727 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 ZKSCAN2Q63HK3 967 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 GLCCI1Q86VQ1 547 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 PRIMA1Q86XR5 153 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 D2HGDHQ8N465 521 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 TDRD7Q8NHU6 1098 aaKnown RBP5.38□□□□□ -1.55
CLIP4-212ENST00000493551 C1orf159Q96HA4 380 aa5.38□□□□□ -1.55
CLIP4-212ENST00000493551 FAM84BQ96KN1 310 aaPredicted RBP5.38□□□□□ -1.55
CLIP4-212ENST00000493551 ZDHHC5Q9C0B5 715 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms