RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 OR1D2P34982 312 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 UBA7P41226 1012 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 LARP1BQ659C4 914 aaKnown RBP13.64□□□□□ -0.23
COL6A1-205ENST00000492851 SLC44A3Q8N4M1 653 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 CALML4Q96GE6 196 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 TSPAN18Q96SJ8 248 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 RUSC1Q9BVN2 902 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 TARS2Q9BW92 718 aaKnown RBP13.64□□□□□ -0.23
COL6A1-205ENST00000492851 PLEKHA5Q9HAU0 1116 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 MTRRQ9UBK8 725 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 CACNG4Q9UBN1 327 aa13.64□□□□□ -0.23
COL6A1-205ENST00000492851 TDRD15B5MCY1 1934 aaKnown RBP13.63□□□□□ -0.23
COL6A1-205ENST00000492851 H7C4K7 107 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 SYN3O14994 580 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 SLC16A4O15374 487 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 CLDN3O15551 220 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 PLA2G4BP0C869 781 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 MYBP10242 640 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 SRFP11831 508 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 AOC1P19801 751 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 MAPK7Q13164 816 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 GLRA4Q5JXX5 417 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 AXDND1Q5T1B0 1012 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-205ENST00000492851 MTSS1LQ765P7 747 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 BRAPQ7Z569 592 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 FLCNQ8NFG4 579 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 ZNF461Q8TAF7 563 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 KCNN1Q92952 543 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 MYADMQ96S97 322 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 KCNH3Q9ULD8 1083 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 ODF2LQ9ULJ1 636 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 MAFFQ9ULX9 164 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 NUB1Q9Y5A7 615 aa13.63□□□□□ -0.23
COL6A1-205ENST00000492851 SFI1A8K8P3 1242 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 ANHXE9PGG2 379 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 PODXLO00592 558 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 N4BP1O75113 896 aaKnown RBP13.62□□□□□ -0.23
COL6A1-205ENST00000492851 PDCP20941 246 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 RFX1P22670 979 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 ELF1P32519 619 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 LONP1P36776 959 aaKnown RBP13.62□□□□□ -0.23
COL6A1-205ENST00000492851 SLC12A3P55017 1021 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 OSTNP61366 133 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 GET4Q7L5D6 327 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-205ENST00000492851 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 GRASPQ7Z6J2 395 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-205ENST00000492851 SIX5Q8N196 739 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 TMEM105Q8N8V8 129 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 TMEM161BQ8NDZ6 487 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 FEZF2Q8TBJ5 459 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 SNX27Q96L92 541 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 PNMA5Q96PV4 448 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 OXCT2Q9BYC2 517 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-205ENST00000492851 CXCL16Q9H2A7 254 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 CDH7Q9ULB5 785 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 CDY1Q9Y6F8 540 aa13.62□□□□□ -0.23
COL6A1-205ENST00000492851 PROB1E7EW31 1015 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 H0Y858 1186 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 STK25O00506 426 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 XPOTO43592 962 aaKnown RBP13.61□□□□□ -0.23
COL6A1-205ENST00000492851 MAPTP10636 758 aaKnown RBP13.61□□□□□ -0.23
COL6A1-205ENST00000492851 PAX3P23760 479 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 MATR3P43243 847 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL6A1-205ENST00000492851 MCL1Q07820 350 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 NOLC1Q14978 699 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL6A1-205ENST00000492851 SLC8B1Q6J4K2 584 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 TAS1R3Q7RTX0 852 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 CEP120Q8N960 986 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 APPL2Q8NEU8 664 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 SLC7A14Q8TBB6 771 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 SHDQ96IW2 340 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 SLC2A4RGQ9NR83 387 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 POLIQ9UNA4 740 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 ZNF318Q5VUA4 2279 aa13.61□□□□□ -0.23
COL6A1-205ENST00000492851 ABLIM1O14639 778 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 ABLIM3O94929 683 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 CFHP08603 1231 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 CLTAP09496 248 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 NPR3P17342 541 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 TKTP29401 623 aaKnown RBP13.6□□□□□ -0.23
COL6A1-205ENST00000492851 MARCKSP29966 332 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-205ENST00000492851 RAD51AP2Q09MP3 1159 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 HTR4Q13639 388 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 TMEM119Q4V9L6 283 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 VARS2Q5ST30 1063 aaKnown RBP13.6□□□□□ -0.23
COL6A1-205ENST00000492851 TPGS2Q68CL5 300 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 PHLDB3Q6NSJ2 640 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 CD300LGQ6UXG3 332 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 HAUS6Q7Z4H7 955 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 RASSF8Q8NHQ8 419 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 RSAD2Q8WXG1 361 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 BICD1Q96G01 975 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 ZMAT2Q96NC0 199 aaKnown RBP13.6□□□□□ -0.23
COL6A1-205ENST00000492851 PLIN2Q99541 437 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 GOLGA2P5Q9HBQ8 144 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 AVENQ9NQS1 362 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-205ENST00000492851 GDE1Q9NZC3 331 aa13.6□□□□□ -0.23
COL6A1-205ENST00000492851 ANKFY1Q9P2R3 1169 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms