RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 B3GAT3O94766 335 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 KCNE1P15382 129 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 SCP2P22307 547 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 RPL9P32969 192 aaKnown RBP10.03□□□□□ -0.8
HDAC3-212ENST00000492407 CCT6AP40227 531 aaKnown RBP10.03□□□□□ -0.8
HDAC3-212ENST00000492407 ST3GAL1Q11201 340 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 GNL2Q13823 731 aaKnown RBP10.03□□□□□ -0.8
HDAC3-212ENST00000492407 UPP1Q16831 310 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 ZNF528Q3MIS6 628 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 AXDND1Q5T1B0 1012 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-212ENST00000492407 NT5DC1Q5TFE4 455 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 SLC8B1Q6J4K2 584 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 ZC3H14Q6PJT7 736 aaKnown RBP10.03□□□□□ -0.8
HDAC3-212ENST00000492407 GET4Q7L5D6 327 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-212ENST00000492407 ERMP1Q7Z2K6 904 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 GRASPQ7Z6J2 395 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-212ENST00000492407 CEP57Q86XR8 500 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 GPR152Q8TDT2 470 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 DRC1Q96MC2 740 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 NELL2Q99435 816 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 DDX23Q9BUQ8 820 aaKnown RBP10.03□□□□□ -0.8
HDAC3-212ENST00000492407 CCDC94Q9BW85 323 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-212ENST00000492407 BHMT2Q9H2M3 363 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 TBC1D17Q9HA65 648 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 PTPRHQ9HD43 1115 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 KIAA1024Q9UPX6 916 aa10.03□□□□□ -0.8
HDAC3-212ENST00000492407 MYO10Q9HD67 2058 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 ARHGEF37A1IGU5 675 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 SYN3O14994 580 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 DTNBO60941 627 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 ECI2O75521 394 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 LMNAP02545 664 aaKnown RBP10.02□□□□□ -0.81
HDAC3-212ENST00000492407 MCF2P10911 925 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 OR1D2P34982 312 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 CLCNKBP51801 687 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 KRT79Q5XKE5 535 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 EEF1DP3Q658K8 133 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 CD300LGQ6UXG3 332 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 GLYCTKQ8IVS8 523 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 C1orf210Q8IVY1 113 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 ADSSL1Q8N142 457 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 FAM184AQ8NB25 1140 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 ZNF461Q8TAF7 563 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 RABGGTAQ92696 567 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 FGF13Q92913 245 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 KCNN1Q92952 543 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 ACO2Q99798 780 aaKnown RBP10.02□□□□□ -0.81
HDAC3-212ENST00000492407 OXCT2Q9BYC2 517 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-212ENST00000492407 MRPL4Q9BYD3 311 aaKnown RBP10.02□□□□□ -0.81
HDAC3-212ENST00000492407 KCND2Q9NZV8 630 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 ARHGAP28Q9P2N2 729 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 CA14Q9ULX7 337 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 KIF3AQ9Y496 699 aa10.02□□□□□ -0.81
HDAC3-212ENST00000492407 KANSL1LA0AUZ9 987 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 H7C4K7 107 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 SLC26A4O43511 780 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 ABLIM3O94929 683 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 ATF2P15336 505 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 PTPN2P17706 415 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 PROZP22891 400 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 GUCY2CP25092 1073 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 NPTX2P47972 431 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 GPC5P78333 572 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 GUCY1B3Q02153 619 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 DMP1Q13316 513 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-212ENST00000492407 MRPL58Q14197 206 aaKnown RBP10.01□□□□□ -0.81
HDAC3-212ENST00000492407 ECM1Q16610 540 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 PABPC1LQ4VXU2 614 aaKnown RBP10.01□□□□□ -0.81
HDAC3-212ENST00000492407 TPGS2Q68CL5 300 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 PARM1Q6UWI2 310 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 CCDC83Q8IWF9 413 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 TCEAL8Q8IYN2 117 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 PJA1Q8NG27 643 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 SLC7A14Q8TBB6 771 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 HASPINQ8TF76 798 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 FGF14Q92915 247 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 ACAP3Q96P50 834 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 TSPAN18Q96SJ8 248 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 DDX19AQ9NUU7 478 aaKnown RBP10.01□□□□□ -0.81
HDAC3-212ENST00000492407 CNTN3Q9P232 1028 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 FBXO4Q9UKT5 387 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 GDAQ9Y2T3 454 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 CDY1Q9Y6F8 540 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 MYO15AQ9UKN7 3530 aa10.01□□□□□ -0.81
HDAC3-212ENST00000492407 PLXNA3P51805 1871 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 CCDC169A6NNP5 214 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 H0YCG3 227 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 ZNF197O14709 1029 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 NCAM2O15394 837 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 CCL16O15467 120 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 ADAM12O43184 909 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 TBC1D4O60343 1298 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 TOM1L1O75674 476 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 EDN1P05305 212 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 MYBP10242 640 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 LIG1P18858 919 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 PAX3P23760 479 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 ELF1P32519 619 aa10□□□□□ -0.81
HDAC3-212ENST00000492407 FOSBP53539 338 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms