RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SPATA31C1P0DKV0 1188 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 CEBPBP17676 345 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 PFKPQ01813 784 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 UVSSAQ2YD98 709 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 EEF1DP3Q658K8 133 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 CENPQQ7L2Z9 268 aaPredicted RBP14.63□□□□□ -0.07
USF1-206ENST00000491629 MAEAQ7L5Y9 396 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 SLFN12Q8IYM2 578 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 BORCS6Q96GS4 357 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 CCDC113Q9H0I3 377 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 KCNH3Q9ULD8 1083 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 CYP46A1Q9Y6A2 500 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 CDY1Q9Y6F8 540 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 STK36Q9NRP7 1315 aa14.63□□□□□ -0.07
USF1-206ENST00000491629 CEP295Q9C0D2 2601 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 ATG2BQ96BY7 2078 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 EML5Q05BV3 1969 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 LRRIQ4A6NIV6 560 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 I3L4J1 428 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 MARCH6O60337 910 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 RHOP08100 348 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 FDPSP14324 419 aaKnown RBP14.62□□□□□ -0.07
USF1-206ENST00000491629 TKTP29401 623 aaKnown RBP14.62□□□□□ -0.07
USF1-206ENST00000491629 MAGEA9P43362 315 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 PRSS36Q5K4E3 855 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.62□□□□□ -0.07
USF1-206ENST00000491629 TCEAL4Q96EI5 215 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
USF1-206ENST00000491629 PRIMPOLQ96LW4 560 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 GOLGA2P5Q9HBQ8 144 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 PRMT7Q9NVM4 692 aaPredicted RBP14.62□□□□□ -0.07
USF1-206ENST00000491629 PCDHA12Q9UN75 941 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 NCANO14594 1321 aa14.62□□□□□ -0.07
USF1-206ENST00000491629 CACNA1GO43497 2377 aa14.61□□□□□ -0.07
USF1-206ENST00000491629 TMEM189-UBE2V1I3L0A0 370 aa14.61□□□□□ -0.07
USF1-206ENST00000491629 BAG4O95429 457 aaKnown RBP14.61□□□□□ -0.07
USF1-206ENST00000491629 CCR2P41597 374 aa14.61□□□□□ -0.07
USF1-206ENST00000491629 BRCC3P46736 316 aa14.61□□□□□ -0.07
USF1-206ENST00000491629 CLCNKBP51801 687 aa14.61□□□□□ -0.07
USF1-206ENST00000491629 SOX4Q06945 474 aaPredicted RBP14.61□□□□□ -0.07
USF1-206ENST00000491629 ADCY1Q08828 1119 aa14.61□□□□□ -0.07
USF1-206ENST00000491629 GLRA4Q5JXX5 417 aa14.61□□□□□ -0.07
USF1-206ENST00000491629 PPP1R10Q96QC0 940 aaKnown RBP14.61□□□□□ -0.07
USF1-206ENST00000491629 MTMR9Q96QG7 549 aa14.61□□□□□ -0.07
USF1-206ENST00000491629 NAP1L4Q99733 375 aaKnown RBP14.61□□□□□ -0.07
USF1-206ENST00000491629 TM6SF1Q9BZW5 370 aa14.61□□□□□ -0.07
USF1-206ENST00000491629 TTC12Q9H892 705 aaPredicted RBP14.61□□□□□ -0.07
USF1-206ENST00000491629 AVENQ9NQS1 362 aaPredicted RBP14.61□□□□□ -0.07
USF1-206ENST00000491629 MRPS23Q9Y3D9 190 aaKnown RBP14.61□□□□□ -0.07
USF1-206ENST00000491629 MYH11P35749 1972 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 ARHGEF37A1IGU5 675 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 N4BP3O15049 544 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 TBC1D4O60343 1298 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 MED24O75448 989 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 ELAVL2Q12926 359 aaKnown RBP14.6□□□□□ -0.07
USF1-206ENST00000491629 GRM2Q14416 872 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 LPAL2Q16609 132 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 ZNF852Q6ZMS4 543 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 GPR161Q8N6U8 529 aaKnown RBP14.6□□□□□ -0.07
USF1-206ENST00000491629 ELSPBP1Q96BH3 223 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 ZSWIM3Q96MP5 696 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 NELL2Q99435 816 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 TMEM60Q9H2L4 133 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 POLD4Q9HCU8 107 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 GDE1Q9NZC3 331 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 TPCN1Q9ULQ1 816 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 GDAQ9Y2T3 454 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 BACE2Q9Y5Z0 518 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.6□□□□□ -0.07
USF1-206ENST00000491629 ASPMQ8IZT6 3477 aa14.6□□□□□ -0.07
USF1-206ENST00000491629 NUP210Q8TEM1 1887 aaPredicted RBP14.59□□□□□ -0.07
USF1-206ENST00000491629 WDR27A2RRH5 827 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 PRR5-ARHGAP8B1AHC4 643 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 PFKFB2O60825 505 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 MOSPD3O75425 235 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 ABLIM3O94929 683 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 SEC24AO95486 1093 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 PRKCBP05771 671 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 XRCC6P12956 609 aaKnown RBP eCLIP14.59□□□□□ -0.07
USF1-206ENST00000491629 TXKP42681 527 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 RBM25P49756 843 aaKnown RBP14.59□□□□□ -0.07
USF1-206ENST00000491629 ARHGAP8P85298 464 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 ROR1Q01973 937 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 LMNB2Q03252 620 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 SPEM2Q0P670 501 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 GAS6Q14393 721 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 CALCRLQ16602 461 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 UPP1Q16831 310 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 WDR44Q5JSH3 913 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 FAM78AQ5JUQ0 283 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 NT5DC1Q5TFE4 455 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 PDXDC1Q6P996 788 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 CPLX2Q6PUV4 134 aaKnown RBP14.59□□□□□ -0.07
USF1-206ENST00000491629 CATSPER3Q86XQ3 398 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 RTKNQ9BST9 563 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 CHRDQ9H2X0 955 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 PDRG1Q9NUG6 133 aa14.59□□□□□ -0.07
USF1-206ENST00000491629 CDV3Q9UKY7 258 aaKnown RBP14.59□□□□□ -0.07
USF1-206ENST00000491629 USP18Q9UMW8 372 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms