RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 KRT15P19012 456 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 COMTP21964 271 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 AMPD2Q01433 879 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PPIL2Q13356 520 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PIGHQ14442 188 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 EFCAB12Q6NXP0 572 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 TRIM50Q86XT4 487 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PASD1Q8IV76 773 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 IL31RAQ8NI17 732 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PARD3BQ8TEW8 1205 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 FBXO41Q8TF61 875 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ATP8B4Q8TF62 1192 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ATP6V1G3Q96LB4 118 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 TLR10Q9BXR5 811 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PCDHA2Q9Y5H9 948 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CNTNAP1P78357 1384 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CLTAP09496 248 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 EPHX2P34913 555 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 MRPS25P82663 173 aaKnown RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 RBP5P82980 135 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 TFDP2Q14188 446 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 NOL9Q5SY16 702 aaKnown RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 GKAP1Q5VSY0 366 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 FYB2Q5VWT5 728 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 LMBRD2Q68DH5 695 aaPredicted RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ARMCX2Q7L311 632 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CD302Q8IX05 232 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CCDC13Q8IYE1 715 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 EIF1ADQ8N9N8 165 aaKnown RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 OR6J1Q8NGC5 347 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ATL2Q8NHH9 583 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 SNF8Q96H20 258 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ZNF518BQ9C0D4 1074 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 RASSF4Q9H2L5 321 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PPANQ9NQ55 473 aaKnown RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 DDX3XO00571 662 aaKnown RBP eCLIP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PLA2G4AP47712 749 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 VPS41P49754 854 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CENPCQ03188 943 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 KCNA1Q09470 495 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 VGLL4Q14135 290 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 HHATQ5VTY9 493 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 MPZL3Q6UWV2 235 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CREG2Q8IUH2 290 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CACNA2D3Q8IZS8 1091 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 MICALL1Q8N3F8 863 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 LRRN4CLQ8ND94 238 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 TMEM161BQ8NDZ6 487 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PRPF31Q8WWY3 499 aaKnown RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PPM1EQ8WY54 764 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 CAVIN3Q969G5 261 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 TTC25Q96NG3 672 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PURBQ96QR8 312 aaKnown RBP7.82□□□□□ -1.16
NPHP3-208ENST00000490993 PORCNQ9H237 461 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 FAM169AQ9Y6X4 670 aa7.82□□□□□ -1.16
NPHP3-208ENST00000490993 ESYT3A0FGR9 886 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 SPDYE16A6NNV3 312 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 TNFRSF8P28908 595 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 TMEM132BQ14DG7 1078 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 CBWD6Q4V339 395 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 CBWD3Q5JTY5 395 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 CBWD5Q5RIA9 395 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 C9orf131Q5VYM1 1079 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 SV2AQ7L0J3 742 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 FOXP3Q9BZS1 431 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 NKRFO15226 690 aaKnown RBP eCLIP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ZNF189O75820 626 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ECM2O94769 699 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 STX2P32856 288 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 FNTAP49354 379 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 PHLDB2Q86SQ0 1253 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 TAS1R2Q8TE23 839 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 RNF34Q969K3 372 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 P2RX7Q99572 595 aaKnown RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 TRIM7Q9C029 511 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 NCANO14594 1321 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ASTN2O75129 1339 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 LOC102724159A0A0B4J2E5 919 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 H7C0C1 242 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 PSTPIP1O43586 416 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 LSM8O95777 96 aaKnown RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ITIH2P19823 946 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ATP5OP48047 213 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 PSMC1P62191 440 aaKnown RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 RRP1BQ14684 758 aaKnown RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 PWP2Q15269 919 aaKnown RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 CLEC16AQ2KHT3 1053 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 BZW1Q7L1Q6 419 aaKnown RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 IRF2BP2Q7Z5L9 587 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 PAF1Q8N7H5 531 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 SLC30A5Q8TAD4 765 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 CPA5Q8WXQ8 436 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 KATNAL1Q9BW62 490 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 INTS9Q9NV88 658 aaKnown RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 NOVA2Q9UNW9 492 aaKnown RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 TNRC6CQ9HCJ0 1690 aaKnown RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 CCL15-CCL14A0A0B4J2E2 113 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 LRRIQ3A6PVS8 624 aaPredicted RBP7.81□□□□□ -1.16
NPHP3-208ENST00000490993 MYL3P08590 195 aa7.81□□□□□ -1.16
NPHP3-208ENST00000490993 ZSCAN20P17040 1043 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms