RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 EPSTI1Q96J88 318 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 MFSD14AQ96MC6 490 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 UROC1Q96N76 676 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 ZMAT2Q96NC0 199 aaKnown RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 NTPCRQ9BSD7 190 aaKnown RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 PIDD1Q9HB75 910 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 PARVGQ9HBI0 331 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 SLC38A7Q9NVC3 462 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 CNTN3Q9P232 1028 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 KCNG1Q9UIX4 513 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 FBXO2Q9UK22 296 aaPredicted RBP11.33□□□□□ -0.6
RBM39-236ENST00000490484 ODF2LQ9ULJ1 636 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 SORCS3Q9UPU3 1222 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 CLUHO75153 1309 aa11.33□□□□□ -0.6
RBM39-236ENST00000490484 PDCD11Q14690 1871 aaKnown RBP11.32□□□□□ -0.6
RBM39-236ENST00000490484 ZDBF2Q9HCK1 2354 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 H0YCG3 227 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 PODXLO00592 558 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 CLDN3O15551 220 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 ADAM12O43184 909 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 CXCL8P10145 99 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 TKTP29401 623 aaKnown RBP11.32□□□□□ -0.6
RBM39-236ENST00000490484 BRCC3P46736 316 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 LIG4P49917 911 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 ZNF131P52739 623 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 XKR4Q5GH76 650 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 LIN9Q5TKA1 542 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 PDXDC1Q6P996 788 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 DCLRE1AQ6PJP8 1040 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 ALKAL1Q6UXT8 129 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 USP49Q70CQ1 688 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 GET4Q7L5D6 327 aaPredicted RBP11.32□□□□□ -0.6
RBM39-236ENST00000490484 HAUS6Q7Z4H7 955 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 SUGP1Q8IWZ8 645 aaKnown RBP11.32□□□□□ -0.6
RBM39-236ENST00000490484 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 MYCT1Q8N699 235 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 LARP4BQ92615 738 aaKnown RBP11.32□□□□□ -0.6
RBM39-236ENST00000490484 STAMQ92783 540 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 C18orf25Q96B23 403 aaPredicted RBP11.32□□□□□ -0.6
RBM39-236ENST00000490484 ACSF2Q96CM8 615 aaPredicted RBP11.32□□□□□ -0.6
RBM39-236ENST00000490484 ASIC4Q96FT7 647 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 CLSTN3Q9BQT9 956 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 CCSER1Q9C0I3 900 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 PLEKHA4Q9H4M7 779 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 WDR6Q9NNW5 1121 aaKnown RBP11.32□□□□□ -0.6
RBM39-236ENST00000490484 ZDHHC7Q9NXF8 308 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 TUBGCP4Q9UGJ1 667 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 FBXW11Q9UKB1 542 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 MTMR6Q9Y217 621 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 KMT2EQ8IZD2 1858 aa11.32□□□□□ -0.6
RBM39-236ENST00000490484 TRAPPC3O43617 180 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 N4BP1O75113 896 aaKnown RBP11.31□□□□□ -0.6
RBM39-236ENST00000490484 C8AP07357 584 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 KCNE1P15382 129 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 FGFR3P22607 806 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 GBP2P32456 591 aaPredicted RBP11.31□□□□□ -0.6
RBM39-236ENST00000490484 TXLNAP40222 546 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 SPAG1Q07617 926 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 MCL1Q07820 350 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 LILRA6Q6PI73 481 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 CD300LGQ6UXG3 332 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 BMP8AQ7Z5Y6 402 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 UBALD2Q8IYN6 164 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 HDAC7Q8WUI4 952 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 DDX27Q96GQ7 796 aaKnown RBP11.31□□□□□ -0.6
RBM39-236ENST00000490484 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 USP28Q96RU2 1077 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 HAPLN2Q9GZV7 340 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 MTRRQ9UBK8 725 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 TBX20Q9UMR3 447 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
RBM39-236ENST00000490484 CDY1Q9Y6F8 540 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 MYH15Q9Y2K3 1946 aa11.31□□□□□ -0.6
RBM39-236ENST00000490484 MTCL1Q9Y4B5 1905 aaKnown RBP11.31□□□□□ -0.6
RBM39-236ENST00000490484 STX6O43752 255 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 TRAK2O60296 914 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 ZMYND10O75800 440 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 C1RP00736 705 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 PDGFBP01127 241 aaPredicted RBP11.3□□□□□ -0.6
RBM39-236ENST00000490484 TNFSF9P41273 254 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 VCPP55072 806 aaKnown RBP11.3□□□□□ -0.6
RBM39-236ENST00000490484 PPP2R3AQ06190 1150 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 PPM1LQ5SGD2 360 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 ZBTB41Q5SVQ8 909 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 RSPO2Q6UXX9 243 aaPredicted RBP11.3□□□□□ -0.6
RBM39-236ENST00000490484 CYP26C1Q6V0L0 522 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 TMEM130Q8N3G9 435 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 FBXL6Q8N531 539 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 KRI1Q8N9T8 703 aaKnown RBP11.3□□□□□ -0.6
RBM39-236ENST00000490484 SLC7A14Q8TBB6 771 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 RHOBTB2Q9BYZ6 727 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 PRKD2Q9BZL6 878 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 STK17AQ9UEE5 414 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 CCDC39Q9UFE4 941 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 POLIQ9UNA4 740 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 NUB1Q9Y5A7 615 aa11.3□□□□□ -0.6
RBM39-236ENST00000490484 SRPRBQ9Y5M8 271 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms