RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FSHRP23945 695 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 ABCD1P33897 745 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 DEKP35659 375 aaKnown RBP11.35□□□□□ -0.59
TTC28-207ENST00000490475 NBL1P41271 181 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 GRM5P41594 1212 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 STRN3Q13033 797 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 RAB33AQ14088 237 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 BECN1Q14457 450 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 SLC39A14Q15043 492 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 RTP2Q5QGT7 225 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 USP49Q70CQ1 688 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 KCNK18Q7Z418 384 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 SIX5Q8N196 739 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 SLC44A3Q8N4M1 653 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 TMEM105Q8N8V8 129 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 LNX1Q8TBB1 728 aaPredicted RBP11.35□□□□□ -0.59
TTC28-207ENST00000490475 BSNDQ8WZ55 320 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 CLIC6Q96NY7 704 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 PNMA5Q96PV4 448 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 CLSTN3Q9BQT9 956 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 SEMA4AQ9H3S1 761 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 KMT5AQ9NQR1 393 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 KCNH3Q9ULD8 1083 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 GDAQ9Y2T3 454 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 ZDHHC9Q9Y397 364 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 BACE2Q9Y5Z0 518 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 TRIP11Q15643 1979 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 FAM186AA6NE01 2351 aa11.35□□□□□ -0.59
TTC28-207ENST00000490475 ZFHX2Q9C0A1 2572 aaPredicted RBP11.35□□□□□ -0.59
TTC28-207ENST00000490475 MYH11P35749 1972 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 ANHXE9PGG2 379 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 F8W810 466 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 STK25O00506 426 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 C8AP07357 584 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 SPATA31D3P0C874 917 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 MCF2P10911 925 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 PDIA4P13667 645 aaKnown RBP11.34□□□□□ -0.59
TTC28-207ENST00000490475 FGFR3P22607 806 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 GUCY2CP25092 1073 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 RPL9P32969 192 aaKnown RBP11.34□□□□□ -0.59
TTC28-207ENST00000490475 NPTX2P47972 431 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 PEX3P56589 373 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 NAB2Q15742 525 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 KYAT1Q16773 422 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 ZNF568Q3ZCX4 644 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 PHLDB3Q6NSJ2 640 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 PRSS55Q6UWB4 352 aaPredicted RBP11.34□□□□□ -0.59
TTC28-207ENST00000490475 SPATA31D4Q6ZUB0 917 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 GLYCTKQ8IVS8 523 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 CCDC105Q8IYK2 499 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 BORCS6Q96GS4 357 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 EPSTI1Q96J88 318 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 CDK5RAP3Q96JB5 506 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 ACAP3Q96P50 834 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 PPP1R10Q96QC0 940 aaKnown RBP11.34□□□□□ -0.59
TTC28-207ENST00000490475 ACO2Q99798 780 aaKnown RBP11.34□□□□□ -0.59
TTC28-207ENST00000490475 NTPCRQ9BSD7 190 aaKnown RBP11.34□□□□□ -0.59
TTC28-207ENST00000490475 TCHPQ9BT92 498 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 SLC2A4RGQ9NR83 387 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 ARHGAP28Q9P2N2 729 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 MTRRQ9UBK8 725 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 FBXO2Q9UK22 296 aaPredicted RBP11.34□□□□□ -0.59
TTC28-207ENST00000490475 CDH7Q9ULB5 785 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 MAFFQ9ULX9 164 aa11.34□□□□□ -0.59
TTC28-207ENST00000490475 SRPRBQ9Y5M8 271 aaKnown RBP11.34□□□□□ -0.59
TTC28-207ENST00000490475 SMIM28A0A1B0GU29 152 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 H7C4K7 107 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 SYN3O14994 580 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 N4BP1O75113 896 aaKnown RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 HIP1RO75146 1068 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 RPL17P18621 184 aaKnown RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 ELF1P32519 619 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 LONP1P36776 959 aaKnown RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 UBA7P41226 1012 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 NASPP49321 788 aaPredicted RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 PFKPQ01813 784 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 UPP1Q16831 310 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 XKR4Q5GH76 650 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 HYIQ5T013 277 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 AXDND1Q5T1B0 1012 aaPredicted RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 NT5DC1Q5TFE4 455 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 EEF1DP3Q658K8 133 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 CWF19L1Q69YN2 538 aaKnown RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 MPZL3Q6UWV2 235 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 GET4Q7L5D6 327 aaPredicted RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 LINC00301Q8NCQ3 95 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 HASPINQ8TF76 798 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 CHAMP1Q96JM3 812 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 B3GALT6Q96L58 329 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 AK8Q96MA6 479 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 ZNF396Q96N95 335 aaPredicted RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 MYADMQ96S97 322 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 TSPAN18Q96SJ8 248 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 PAAF1Q9BRP4 392 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 OXCT2Q9BYC2 517 aaPredicted RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 PANK2Q9BZ23 570 aa11.33□□□□□ -0.6
TTC28-207ENST00000490475 LARSQ9P2J5 1176 aaKnown RBP11.33□□□□□ -0.6
TTC28-207ENST00000490475 VWA8A3KMH1 1905 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms