RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 MTAPQ13126 283 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 NR5A1Q13285 461 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 FZD5Q13467 585 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 CALCRLQ16602 461 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 FAM187BQ17R55 369 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 TMEM132AQ24JP5 1023 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 SLC5A9Q2M3M2 681 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 TANGO2Q6ICL3 276 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 POTEHQ6S545 545 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 RTL10Q7L3V2 364 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 NOSTRINQ8IVI9 506 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 TTC12Q9H892 705 aaPredicted RBP15.42■□□□□ 0.06
VARS-227ENST00000489979 GDE1Q9NZC3 331 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 USP20Q9Y2K6 914 aa15.42■□□□□ 0.06
VARS-227ENST00000489979 MRPS17Q9Y2R5 130 aaKnown RBP15.42■□□□□ 0.06
VARS-227ENST00000489979 SHISA7A6NL88 538 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 XRCC6P12956 609 aaKnown RBP eCLIP15.41■□□□□ 0.06
VARS-227ENST00000489979 CEBPBP17676 345 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 TXKP42681 527 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 ADCY1Q08828 1119 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 PRPF4BQ13523 1007 aaKnown RBP15.41■□□□□ 0.06
VARS-227ENST00000489979 RTKNQ9BST9 563 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 TM6SF1Q9BZW5 370 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 PARD6AQ9NPB6 346 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 PDRG1Q9NUG6 133 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 GMEB2Q9UKD1 530 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 GDAQ9Y2T3 454 aa15.41■□□□□ 0.06
VARS-227ENST00000489979 TMEM189-UBE2V1I3L0A0 370 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 B3GAT3O94766 335 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 EDN1P05305 212 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 PRKCBP05771 671 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 LIG1P18858 919 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 ATP2B1P20020 1258 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 TKTP29401 623 aaKnown RBP15.4■□□□□ 0.06
VARS-227ENST00000489979 KRT2P35908 639 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 CLCNKBP51801 687 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 GLRA4Q5JXX5 417 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 CD300LGQ6UXG3 332 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 MCPH1Q8NEM0 835 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 TNFRSF25Q93038 417 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 ELSPBP1Q96BH3 223 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 DDX27Q96GQ7 796 aaKnown RBP15.4■□□□□ 0.06
VARS-227ENST00000489979 ADPGKQ9BRR6 497 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 FAM126AQ9BYI3 521 aaPredicted RBP15.4■□□□□ 0.06
VARS-227ENST00000489979 C2orf40Q9H1Z8 148 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 AVENQ9NQS1 362 aaPredicted RBP15.4■□□□□ 0.06
VARS-227ENST00000489979 NDRG2Q9UN36 371 aaKnown RBP15.4■□□□□ 0.06
VARS-227ENST00000489979 BACE2Q9Y5Z0 518 aa15.4■□□□□ 0.06
VARS-227ENST00000489979 I3L4J1 428 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 WNT7AO00755 349 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 SPATA31C1P0DKV0 1188 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 TDGF1P13385 188 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 PTPN2P17706 415 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 RBM25P49756 843 aaKnown RBP15.39■□□□□ 0.05
VARS-227ENST00000489979 GRM2Q14416 872 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 LPAL2Q16609 132 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 MAPK6Q16659 721 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 EEF1DP3Q658K8 133 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 ANKS3Q6ZW76 656 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 ZNF687Q8N1G0 1237 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 BSNDQ8WZ55 320 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 DNASE1L2Q92874 299 aa15.39■□□□□ 0.05
VARS-227ENST00000489979 PPP1R10Q96QC0 940 aaKnown RBP15.39■□□□□ 0.05
VARS-227ENST00000489979 ORC3Q9UBD5 711 aaPredicted RBP15.39■□□□□ 0.05
VARS-227ENST00000489979 ARHGEF37A1IGU5 675 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 ACKR2O00590 384 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 NEMFO60524 1076 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 PFKFB2O60825 505 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 CTDNEP1O95476 244 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 LRG1P02750 347 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 FCARP24071 287 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 BRCC3P46736 316 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 ROR1Q01973 937 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 UPP1Q16831 310 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 PRSS36Q5K4E3 855 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 C3orf58Q8NDZ4 430 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 TCEAL4Q96EI5 215 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 MTMR9Q96QG7 549 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 CORO1BQ9BR76 489 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 CCDC113Q9H0I3 377 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 CHRDQ9H2X0 955 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 BRD9Q9H8M2 597 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 GOLGA2P5Q9HBQ8 144 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 BRMS1Q9HCU9 246 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 RAB23Q9ULC3 237 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 TPCN1Q9ULQ1 816 aa15.38■□□□□ 0.05
VARS-227ENST00000489979 MAP1BP46821 2468 aaKnown RBP15.38■□□□□ 0.05
VARS-227ENST00000489979 TICRRQ7Z2Z1 1910 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 MAN2B1O00754 1011 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 NRG2O14511 850 aaPredicted RBP15.37■□□□□ 0.05
VARS-227ENST00000489979 EPB41L2O43491 1005 aaKnown RBP15.37■□□□□ 0.05
VARS-227ENST00000489979 TRAPPC3O43617 180 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 MED24O75448 989 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 ELF1P32519 619 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 NRLP54845 237 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 SPEM2Q0P670 501 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 DCAF4L1Q3SXM0 396 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 FAM78AQ5JUQ0 283 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 CATSPER3Q86XQ3 398 aa15.37■□□□□ 0.05
VARS-227ENST00000489979 ZNF461Q8TAF7 563 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms