RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 NSUN6Q8TEA1 469 aaKnown RBP6.88□□□□□ -1.31
CCDC39-206ENST00000489868 HSPBAP1Q96EW2 488 aa6.88□□□□□ -1.31
CCDC39-206ENST00000489868 KRTAP4-11Q9BYQ6 195 aa6.88□□□□□ -1.31
CCDC39-206ENST00000489868 RHOBTB2Q9BYZ6 727 aa6.88□□□□□ -1.31
CCDC39-206ENST00000489868 SCAND2PQ9GZW5 306 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-206ENST00000489868 TRPM5Q9NZQ8 1165 aa6.88□□□□□ -1.31
CCDC39-206ENST00000489868 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-206ENST00000489868 CCDC78A2IDD5 438 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 LRRC14BA6NHZ5 514 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 AKAP10O43572 662 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 SGTAO43765 313 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 RPS6KA4O75676 772 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 PDCP20941 246 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 MGAT1P26572 445 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 UBXN2BQ14CS0 331 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 AGAP9Q5VTM2 703 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 MED25Q71SY5 747 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 GDF7Q7Z4P5 450 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 ZFPM1Q8IX07 1006 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 MIER2Q8N344 545 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 PRR18Q8N4B5 295 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 ZNF276Q8N554 614 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 SLC25A43Q8WUT9 341 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-206ENST00000489868 CLPTM1LQ96KA5 538 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 FAM30AQ9NZY2 134 aa6.87□□□□□ -1.31
CCDC39-206ENST00000489868 USP15Q9Y4E8 981 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-206ENST00000489868 TEX33O43247 280 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 NCR1O76036 304 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 IL33O95760 270 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 ITGB1P05556 798 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 PF4V1P10720 104 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 TLE1Q04724 770 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 PIN1Q13526 163 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-206ENST00000489868 DACT2Q5SW24 774 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 RHOUQ7L0Q8 258 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 RSPH3Q86UC2 560 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 DRC7Q8IY82 874 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 CEP89Q96ST8 783 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 GTPBP4Q9BZE4 634 aaKnown RBP6.86□□□□□ -1.31
CCDC39-206ENST00000489868 C11orf54Q9H0W9 315 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-206ENST00000489868 MMRN2Q9H8L6 949 aa6.86□□□□□ -1.31
CCDC39-206ENST00000489868 ZNF202O95125 648 aa6.85□□□□□ -1.31
CCDC39-206ENST00000489868 POMCP01189 267 aa6.85□□□□□ -1.31
CCDC39-206ENST00000489868 POU2F2P09086 479 aa6.85□□□□□ -1.31
CCDC39-206ENST00000489868 FLYWCH1Q4VC44 716 aa6.85□□□□□ -1.31
CCDC39-206ENST00000489868 ODR4Q5SWX8 454 aa6.85□□□□□ -1.31
CCDC39-206ENST00000489868 LRRC55Q6ZSA7 311 aa6.85□□□□□ -1.31
CCDC39-206ENST00000489868 DCLRE1CQ96SD1 692 aaKnown RBP6.85□□□□□ -1.31
CCDC39-206ENST00000489868 SLC46A2Q9BY10 475 aa6.85□□□□□ -1.31
CCDC39-206ENST00000489868 KRTAP4-2Q9BYR5 136 aa6.85□□□□□ -1.31
CCDC39-206ENST00000489868 HS3ST3A1Q9Y663 406 aa6.85□□□□□ -1.31
CCDC39-206ENST00000489868 CFAP20Q9Y6A4 193 aaKnown RBP6.85□□□□□ -1.31
CCDC39-206ENST00000489868 KIAA0391O15091 583 aaKnown RBP6.84□□□□□ -1.31
CCDC39-206ENST00000489868 GRM6O15303 877 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 RECQL4O94761 1208 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 PEX11BO96011 259 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 ELANEP08246 267 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 ACVRL1P37023 503 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 USP45Q70EL2 814 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 MRGPREQ86SM8 312 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 RHOT2Q8IXI1 618 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 ZNF483Q8TF39 744 aaPredicted RBP6.84□□□□□ -1.31
CCDC39-206ENST00000489868 VRK1Q99986 396 aaPredicted RBP6.84□□□□□ -1.31
CCDC39-206ENST00000489868 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 GSTO2Q9H4Y5 243 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 NRDE2Q9H7Z3 1164 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 AKIP1Q9NQ31 210 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 KLHL11Q9NVR0 708 aa6.84□□□□□ -1.31
CCDC39-206ENST00000489868 CDHR4A6H8M9 788 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 MARCH11A6NNE9 402 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 LPXNO60711 386 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 FSHBP01225 129 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 BEAN1Q3B7T3 259 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 KHDC1Q4VXA5 237 aaKnown RBP6.83□□□□□ -1.32
CCDC39-206ENST00000489868 OR56A1Q8NGH5 318 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 JPH3Q8WXH2 748 aaPredicted RBP6.83□□□□□ -1.32
CCDC39-206ENST00000489868 CLIP3Q96DZ5 547 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 ZSWIM1Q9BR11 485 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 CDH19Q9H159 772 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 SLC12A5Q9H2X9 1139 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 DKK2Q9UBU2 259 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 ANKRD6Q9Y2G4 727 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 MAP3K2Q9Y2U5 619 aa6.83□□□□□ -1.32
CCDC39-206ENST00000489868 REXO2Q9Y3B8 237 aaKnown RBP6.83□□□□□ -1.32
CCDC39-206ENST00000489868 NT5C1B-RDH14C9J2C7 533 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 FZD7O75084 574 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 CD1AP06126 327 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 GCSHP23434 173 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 EPHB1P54762 984 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 NOMO3P69849 1222 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 KLF10Q13118 480 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 SNAPC2Q13487 334 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 RAB39AQ14964 217 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 LRRC41Q15345 812 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 NOMO2Q5JPE7 1267 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 TSHZ3Q63HK5 1081 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 TPH2Q8IWU9 490 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 SLC16A11Q8NCK7 471 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 LENG9Q96B70 501 aa6.82□□□□□ -1.32
CCDC39-206ENST00000489868 FAM193BQ96PV7 902 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms