RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 LONRF1Q17RB8 773 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 SLC4A8Q2Y0W8 1093 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 INAVAQ3KP66 663 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 C1QL3Q5VWW1 255 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 ZNF280DQ6N043 979 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 SPATS2Q86XZ4 545 aaKnown RBP3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 CMIPQ8IY22 773 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 SMC1BQ8NDV3 1235 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 ATXN2LQ8WWM7 1075 aaKnown RBP3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 BBC3Q96PG8 261 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 CAMKK2Q96RR4 588 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 NAA15Q9BXJ9 866 aaKnown RBP3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 PUS7LQ9H0K6 701 aaKnown RBP3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 ZHX3Q9H4I2 956 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 SPTLC3Q9NUV7 552 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 GOLGA6AQ9NYA3 693 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 PHTF1Q9UMS5 762 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 USP18Q9UMW8 372 aa3.92□□□□□ -1.78
DEPDC1-204ENST00000489862 E2F8A0AVK6 867 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 hCG_1984214I3L0E3 225 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 EPB41L2O43491 1005 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 MFAP3LO75121 409 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 CFBP00751 764 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 NBPF7P0C2Y1 421 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 BPIP17213 487 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 LPOP22079 712 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 USP14P54578 494 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 ERVK-21P61565 698 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 TOB2Q14106 344 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 SPIDRQ14159 915 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 MAN2A1Q16706 1144 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 FAM214AQ32MH5 1076 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 ESPNLQ6ZVH7 1005 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 SUGP1Q8IWZ8 645 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 PPP1R14CQ8TAE6 165 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 MNTQ99583 582 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 ELAC2Q9BQ52 826 aaKnown RBP3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 CENPOQ9BU64 300 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 PLCB1Q9NQ66 1216 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 GPRC5BQ9NZH0 403 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 PCDHB6Q9Y5E3 794 aa3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 MORC2Q9Y6X9 1032 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1-204ENST00000489862 PRSS38A1L453 326 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 PCDHGA12O60330 932 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 ALDH1A2O94788 518 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 AGR2O95994 175 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 MYBL2P10244 700 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 SLC5A1P13866 664 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 SCNN1BP51168 640 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 ZNF280AP59817 542 aaPredicted RBP3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 GBX1Q14549 363 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 KCTD2Q14681 263 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 MFSD5Q6N075 450 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 TOGARAM2Q6ZUX3 1019 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 CLASRPQ8N2M8 674 aaKnown RBP3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 PPM1KQ8N3J5 372 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 CPA6Q8N4T0 437 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 C9orf106Q8NAJ2 232 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 MDGA1Q8NFP4 955 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 FBXO41Q8TF61 875 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 FERMT2Q96AC1 680 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 RUNDC1Q96C34 613 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 FUBP3Q96I24 572 aaKnown RBP eCLIP3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 ANAPC4Q9UJX5 808 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 PCDHGA9Q9Y5G4 932 aaKnown RBP3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 PCDHGA8Q9Y5G5 932 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 PCDHGA7Q9Y5G6 932 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 PCDHGA6Q9Y5G7 932 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 PCDHGA3Q9Y5H0 932 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 PCDHGA2Q9Y5H1 932 aa3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 SETD1BQ9UPS6 1966 aaKnown RBP3.9□□□□□ -1.79
DEPDC1-204ENST00000489862 MTSS1O43312 755 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 RNASEH2AO75792 299 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 LY86O95711 162 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 PFKMP08237 780 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 HK1P19367 917 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 PROZP22891 400 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 RRM1P23921 792 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 CASRP41180 1078 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 ADCYAP1R1P41586 468 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 FXR1P51114 621 aaKnown RBP eCLIP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 RENBPP51606 427 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 PTTG1IPP53801 180 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 CHAF1AQ13111 956 aaPredicted RBP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 STK3Q13188 491 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 SART3Q15020 963 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 TOMM20Q15388 145 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 SAFBQ15424 915 aaKnown RBP eCLIP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 ATP13A4Q4VNC1 1196 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 CXorf57Q6NSI4 855 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 CPXCR1Q8N123 301 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 ENAHQ8N8S7 591 aaPredicted RBP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 CDYL2Q8N8U2 506 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 GAB3Q8WWW8 586 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 ST8SIA2Q92186 375 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 GJA10Q969M2 543 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 TTC1Q99614 292 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 EIF2AK1Q9BQI3 630 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms