RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CITO14578 2027 aa12.95□□□□□ -0.34
ACTN4-206ENST00000489451 WDR87Q6ZQQ6 2873 aa12.95□□□□□ -0.34
ACTN4-206ENST00000489451 I3L4J1 428 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 NRG2O14511 850 aaPredicted RBP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 CCL16O15467 120 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 LMNAP02545 664 aaKnown RBP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 GLULP15104 373 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 FSHRP23945 695 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 TKTP29401 623 aaKnown RBP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 HOXA9P31269 272 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 CCT6AP40227 531 aaKnown RBP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 BRCC3P46736 316 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 CREMQ03060 361 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 RAB33AQ14088 237 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 SAFBQ15424 915 aaKnown RBP eCLIP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 UPP1Q16831 310 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 DCAF4L1Q3SXM0 396 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 ATF7IP2Q5U623 682 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 ELMSAN1Q6PJG2 1045 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 ALKAL1Q6UXT8 129 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 TMEM130Q8N3G9 435 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 ERMNQ8TAM6 284 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 ITFG1Q8TB96 612 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 ZMAT2Q96NC0 199 aaKnown RBP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 RTP3Q9BQQ7 232 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 RUSC1Q9BVN2 902 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 CDT1Q9H211 546 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 SLC2A4RGQ9NR83 387 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 HCFC1R1Q9NWW0 138 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.94□□□□□ -0.34
ACTN4-206ENST00000489451 ARHGAP28Q9P2N2 729 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 MTRRQ9UBK8 725 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 KIAA1024Q9UPX6 916 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 PATJQ8NI35 1801 aa12.94□□□□□ -0.34
ACTN4-206ENST00000489451 E9PMD0 336 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 LRRN2O75325 713 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 PROZP22891 400 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.34
ACTN4-206ENST00000489451 CDC25AP30304 524 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 NPTX2P47972 431 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 TRAPPC10P48553 1259 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 RBM25P49756 843 aaKnown RBP12.93□□□□□ -0.34
ACTN4-206ENST00000489451 PPP2R5AQ15172 486 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 HAUS3Q68CZ6 603 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 SLC7A14Q8TBB6 771 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 FGF13Q92913 245 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 NXPE3Q969Y0 559 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 ACO2Q99798 780 aaKnown RBP12.93□□□□□ -0.34
ACTN4-206ENST00000489451 ADPGKQ9BRR6 497 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 FOXQ1Q9C009 403 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 ARHGEF3Q9NR81 526 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 DNMT3BQ9UBC3 853 aaKnown RBP12.93□□□□□ -0.34
ACTN4-206ENST00000489451 CDH7Q9ULB5 785 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 TNFSF13BQ9Y275 285 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 MIA3Q5JRA6 1907 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 COL4A2P08572 1712 aa12.93□□□□□ -0.34
ACTN4-206ENST00000489451 PHLPP2Q6ZVD8 1323 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 SMIM28A0A1B0GU29 152 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 TBC1D4O60343 1298 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 HIP1RO75146 1068 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 B3GAT3O94766 335 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 DCNP07585 359 aaKnown RBP12.92□□□□□ -0.34
ACTN4-206ENST00000489451 POU2F2P09086 479 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 HNRNPA1P09651 372 aaKnown RBP eCLIP12.92□□□□□ -0.34
ACTN4-206ENST00000489451 OR1D2P34982 312 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 GRM5P41594 1212 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 EFNA5P52803 228 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 PEX3P56589 373 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 GPC5P78333 572 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 PTGDRQ13258 359 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 TMEM132AQ24JP5 1023 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 RSPO4Q2I0M5 234 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-206ENST00000489451 PPM1LQ5SGD2 360 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 PHLDB3Q6NSJ2 640 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 SNX29Q8TEQ0 813 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 KIFAP3Q92845 792 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 TARS2Q9BW92 718 aaKnown RBP12.92□□□□□ -0.34
ACTN4-206ENST00000489451 LRWD1Q9UFC0 647 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 CDY1Q9Y6F8 540 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 MYH11P35749 1972 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 CACNA1IQ9P0X4 2223 aa12.92□□□□□ -0.34
ACTN4-206ENST00000489451 USP24Q9UPU5 2620 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 OSTNP61366 133 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
ACTN4-206ENST00000489451 ELAVL2Q12926 359 aaKnown RBP12.91□□□□□ -0.34
ACTN4-206ENST00000489451 PDIA5Q14554 519 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 SLC5A9Q2M3M2 681 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 C8orf34Q49A92 452 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 AXDND1Q5T1B0 1012 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-206ENST00000489451 LIN9Q5TKA1 542 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 RINT1Q6NUQ1 792 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 C1orf186Q6ZWK4 172 aa12.91□□□□□ -0.34
ACTN4-206ENST00000489451 NPAS3Q8IXF0 933 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms