RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 FAM84AQ96KN4 292 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 FAM81BQ96LP2 452 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 APOL6Q9BWW8 343 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 EIF2AQ9BY44 585 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 STK33Q9BYT3 514 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 NXF3Q9H4D5 531 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 UBE2TQ9NPD8 197 aaPredicted RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.81□□□□□ -0.68
USP11-211ENST00000489111 ST3GAL5Q9UNP4 418 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 R3HCC1Q9Y3T6 440 aaKnown RBP10.81□□□□□ -0.68
USP11-211ENST00000489111 SCN10AQ9Y5Y9 1956 aa10.81□□□□□ -0.68
USP11-211ENST00000489111 C4BPAP04003 597 aaKnown RBP10.8□□□□□ -0.68
USP11-211ENST00000489111 NFICP08651 508 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 CCDC175P0C221 793 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 CKBP12277 381 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 FERP16591 822 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 ZSCAN20P17040 1043 aaPredicted RBP10.8□□□□□ -0.68
USP11-211ENST00000489111 CD52P31358 61 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 JAM2P57087 298 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 KLHL30Q0D2K2 578 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 BFSP2Q13515 415 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 DRAP1Q14919 205 aaPredicted RBP10.8□□□□□ -0.68
USP11-211ENST00000489111 ARHGAP44Q17R89 818 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 FAM26DQ5JW98 314 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 ZNF618Q5T7W0 954 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 E4F1Q66K89 784 aaPredicted RBP10.8□□□□□ -0.68
USP11-211ENST00000489111 JADE1Q6IE81 842 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 PHLDB3Q6NSJ2 640 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 WDR59Q6PJI9 974 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 RAD9BQ6WBX8 426 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 TOGARAM2Q6ZUX3 1019 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 ENOSF1Q7L5Y1 443 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 TRAPPC11Q7Z392 1133 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 NT5DC4Q86YG4 428 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 ARHGEF19Q8IW93 802 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 EFCAB13Q8IY85 973 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 CCDC170Q8IYT3 715 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 C17orf53Q8N3J3 647 aaPredicted RBP10.8□□□□□ -0.68
USP11-211ENST00000489111 USP38Q8NB14 1042 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 CAGE1Q8TC20 777 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 ARMC5Q96C12 935 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 KIF12Q96FN5 646 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 SNX27Q96L92 541 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 CCDC42Q96M95 316 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 PLEKHA5Q9HAU0 1116 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 CHST12Q9NRB3 414 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 SNTG2Q9NY99 539 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 PARP2Q9UGN5 583 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 AJAP1Q9UKB5 411 aaPredicted RBP10.8□□□□□ -0.68
USP11-211ENST00000489111 DERAQ9Y315 318 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 C2CD2Q9Y426 696 aa10.8□□□□□ -0.68
USP11-211ENST00000489111 BZW2Q9Y6E2 419 aaKnown RBP10.8□□□□□ -0.68
USP11-211ENST00000489111 AKR1B10O60218 316 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 ZNF500O60304 480 aaPredicted RBP10.79□□□□□ -0.68
USP11-211ENST00000489111 PQBP1O60828 265 aaKnown RBP10.79□□□□□ -0.68
USP11-211ENST00000489111 LRRN2O75325 713 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 OFD1O75665 1012 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 RECQL4O94761 1208 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 GFPT2O94808 682 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 NDUFA10O95299 355 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 VNN1O95497 513 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 SOX5P35711 763 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 EIF4A3P38919 411 aaKnown RBP10.79□□□□□ -0.68
USP11-211ENST00000489111 USP8P40818 1118 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 RAB27AP51159 221 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 NOP14P78316 857 aaKnown RBP10.79□□□□□ -0.68
USP11-211ENST00000489111 GCNT1Q02742 428 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 LPIN1Q14693 890 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 MTF1Q14872 753 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 SPA17Q15506 151 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 ZNF699Q32M78 642 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 SLC10A6Q3KNW5 377 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 VPS36Q86VN1 386 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 CCAR2Q8N163 923 aaKnown RBP10.79□□□□□ -0.68
USP11-211ENST00000489111 CHP1Q99653 195 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 DESI2Q9BSY9 194 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 PI4K2AQ9BTU6 479 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 CRISPLD2Q9H0B8 497 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 NHEJ1Q9H9Q4 299 aaPredicted RBP10.79□□□□□ -0.68
USP11-211ENST00000489111 ERVK-5Q9HDB9 667 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 TRMT1Q9NXH9 659 aaKnown RBP10.79□□□□□ -0.68
USP11-211ENST00000489111 AIPL1Q9NZN9 384 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 PADI3Q9ULW8 664 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 PPP2R2CQ9Y2T4 447 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 HES2Q9Y543 173 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 IPPQ9Y573 584 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 SQORQ9Y6N5 450 aa10.79□□□□□ -0.68
USP11-211ENST00000489111 SSU72P8A0A1W2PR75 194 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 GOLGA6L9A6NEM1 432 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 XPOTO43592 962 aaKnown RBP10.78□□□□□ -0.68
USP11-211ENST00000489111 SGPL1O95470 568 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 KRT19P08727 400 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 SELPP16109 830 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 TBXAS1P24557 533 aaPredicted RBP10.78□□□□□ -0.68
USP11-211ENST00000489111 ANXA13P27216 316 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 CDK7P50613 346 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 KIF11P52732 1056 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 MYL6P60660 151 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 KRT83P78385 493 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms