RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 NASPP49321 788 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-232ENST00000489053 CLCNKBP51801 687 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 ZNF131P52739 623 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 MCL1Q07820 350 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 HERC4Q5GLZ8 1057 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-232ENST00000489053 KIAA0319Q5VV43 1072 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 ADALQ6DHV7 355 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 SLFN12LQ6IEE8 588 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 PRSS55Q6UWB4 352 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-232ENST00000489053 SPATA31D4Q6ZUB0 917 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 TAS1R3Q7RTX0 852 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 CCDC65Q8IXS2 484 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 GPR65Q8IYL9 337 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 PLCD3Q8N3E9 789 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 SLC22A17Q8WUG5 538 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 HDAC7Q8WUI4 952 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 SMG7Q92540 1137 aaKnown RBP9.95□□□□□ -0.82
HDAC6-232ENST00000489053 DDX12PQ92771 950 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 ZBTB45Q96K62 511 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-232ENST00000489053 PPP1R10Q96QC0 940 aaKnown RBP9.95□□□□□ -0.82
HDAC6-232ENST00000489053 PAAF1Q9BRP4 392 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 S1PR5Q9H228 398 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 RXFP1Q9HBX9 757 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 CHST7Q9NS84 486 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 FNIP2Q9P278 1114 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 CACNG4Q9UBN1 327 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 SEL1LQ9UBV2 794 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 R3HCC1Q9Y3T6 440 aaKnown RBP9.95□□□□□ -0.82
HDAC6-232ENST00000489053 PCDHB13Q9Y5F0 798 aa9.95□□□□□ -0.82
HDAC6-232ENST00000489053 CCDC195A0A1B0GUA6 201 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 LOC730098B7Z3J9 87 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 H7C4K7 107 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 OGTO15294 1046 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 CUTAO60888 179 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 PPP6R2O75170 966 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 XYLBO75191 536 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 GCNT3O95395 438 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 YEATS4O95619 227 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 BRD1O95696 1058 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 F13A1P00488 732 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 CXCL8P10145 99 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 KCNE1P15382 129 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 COL9A1P20849 921 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 PROZP22891 400 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 NMT1P30419 496 aaKnown RBP9.94□□□□□ -0.82
HDAC6-232ENST00000489053 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-232ENST00000489053 KCNC3Q14003 757 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 POSTNQ15063 836 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 SEZ6Q53EL9 994 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 RTP2Q5QGT7 225 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 PPM1LQ5SGD2 360 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 ATL3Q6DD88 541 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 CYP26C1Q6V0L0 522 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 C15orf39Q6ZRI6 1047 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 ANKS3Q6ZW76 656 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 USP49Q70CQ1 688 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 GPR149Q86SP6 731 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 USP37Q86T82 979 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 SFR1Q86XK3 245 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 SUGP1Q8IWZ8 645 aaKnown RBP9.94□□□□□ -0.82
HDAC6-232ENST00000489053 CD302Q8IX05 232 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 IQUBQ8NA54 791 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 KREMEN2Q8NCW0 462 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 APPL2Q8NEU8 664 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 BEST2Q8NFU1 509 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 PIK3R5Q8WYR1 880 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 POMGNT1Q8WZA1 660 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 HVCN1Q96D96 273 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 MFSD14AQ96MC6 490 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 ACCSQ96QU6 501 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 PYM1Q9BRP8 204 aaKnown RBP9.94□□□□□ -0.82
HDAC6-232ENST00000489053 CUEDC2Q9H467 287 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 POMKQ9H5K3 350 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 PLEKHA5Q9HAU0 1116 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 GOLGA2P5Q9HBQ8 144 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 PTPRHQ9HD43 1115 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 BLOC1S4Q9NUP1 217 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 TBC1D7Q9P0N9 293 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 CNTN3Q9P232 1028 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 UBQLN1Q9UMX0 589 aaKnown RBP9.94□□□□□ -0.82
HDAC6-232ENST00000489053 POLIQ9UNA4 740 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 ATP6V1DQ9Y5K8 247 aa9.94□□□□□ -0.82
HDAC6-232ENST00000489053 ARHGEF37A1IGU5 675 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 PRR33A8MZF0 331 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 TMEM189-UBE2V1I3L0A0 370 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 PRRG1O14668 218 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 TGM5O43548 720 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 GPR37L1O60883 481 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 LILRB3O75022 631 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 C1RP00736 705 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 RFX1P22670 979 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 ARPP19P56211 112 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 ASIC1P78348 528 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 GTF2BQ00403 316 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 MTMR3Q13615 1198 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 ALCAMQ13740 583 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 UPP1Q16831 310 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 DSTYKQ6XUX3 929 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 MAP4K3Q8IVH8 894 aa9.93□□□□□ -0.82
HDAC6-232ENST00000489053 LINC00301Q8NCQ3 95 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms