RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CEP85LQ5SZL2 805 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 LRRC71Q8N4P6 559 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 RUSC1Q9BVN2 902 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 UPF3AQ9H1J1 476 aaKnown RBP19.7■□□□□ 0.74
COL16A1-215ENST00000488897 RABEP2Q9H5N1 569 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 STXBP5LQ9Y2K9 1186 aa19.7■□□□□ 0.74
COL16A1-215ENST00000488897 NOC2LQ9Y3T9 749 aaKnown RBP19.7■□□□□ 0.74
COL16A1-215ENST00000488897 EIF3DO15371 548 aaKnown RBP eCLIP19.69■□□□□ 0.74
COL16A1-215ENST00000488897 LSP1P33241 339 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 NFIL3Q16649 462 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 XKR9Q5GH70 373 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 MICALL1Q8N3F8 863 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 ARFGAP2Q8N6H7 521 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 PAWRQ96IZ0 340 aaKnown RBP19.69■□□□□ 0.74
COL16A1-215ENST00000488897 GOLPH3Q9H4A6 298 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 SLITRK6Q9H5Y7 841 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 TMBIM4Q9HC24 238 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 PCDHB13Q9Y5F0 798 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 IGSF9BQ9UPX0 1349 aa19.69■□□□□ 0.74
COL16A1-215ENST00000488897 A0A1W2PQ45 241 aaPredicted RBP19.68■□□□□ 0.74
COL16A1-215ENST00000488897 A0A1W2PQY0 241 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 SRRM3A6NNA2 597 aaPredicted RBP19.68■□□□□ 0.74
COL16A1-215ENST00000488897 ZBTB42B2RXF5 422 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 KRIT1O00522 736 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 DDX3XO00571 662 aaKnown RBP eCLIP19.68■□□□□ 0.74
COL16A1-215ENST00000488897 CLIC2O15247 247 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 LGR5O75473 907 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 ECHS1P30084 290 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 PSMC2P35998 433 aaKnown RBP19.68■□□□□ 0.74
COL16A1-215ENST00000488897 MFSD10Q14728 455 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 CCDC26Q8TAB7 109 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 CEP170P1Q96L14 293 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 SMARCAD1Q9H4L7 1026 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 CCDC85CA6NKD9 419 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 OATP04181 439 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 TMEM62Q0P6H9 643 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 RINT1Q6NUQ1 792 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 BORCS6Q96GS4 357 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 AP1M1Q9BXS5 423 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 ERAP1Q9NZ08 941 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 OGDHLQ9ULD0 1010 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 FRMPD3Q5JV73 1810 aa19.68■□□□□ 0.74
COL16A1-215ENST00000488897 PPP1R37O75864 691 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 ERLIN2O94905 339 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 FAM13AO94988 1023 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 MYZAPP0CAP1 466 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 HSD17B3P37058 310 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 PSEN2P49810 448 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 MTMR3Q13615 1198 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 DAAM2Q86T65 1068 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 NT5DC3Q86UY8 548 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 FMNL3Q8IVF7 1028 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 MKNK1Q9BUB5 465 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 TMEM106CQ9BVX2 250 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 TRMT13Q9NUP7 481 aaKnown RBP19.67■□□□□ 0.74
COL16A1-215ENST00000488897 AJAP1Q9UKB5 411 aaPredicted RBP19.67■□□□□ 0.74
COL16A1-215ENST00000488897 Q9Y3F1 56 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 TREHO43280 583 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 TGFB1I1O43294 461 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 F2P00734 622 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 SMIM10L2AP0DMW4 78 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 SMIM10L2BP0DMW5 78 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 MDH1P40925 334 aaKnown RBP19.67■□□□□ 0.74
COL16A1-215ENST00000488897 MICALCLQ6ZW33 695 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 KSR1Q8IVT5 923 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 FAM186BQ8IYM0 893 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 TUFT1Q9NNX1 390 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 AMFRQ9UKV5 643 aa19.67■□□□□ 0.74
COL16A1-215ENST00000488897 SOX5P35711 763 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 GJA8P48165 433 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 GUCY1A3Q02108 690 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 FAM160B1Q5W0V3 765 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 RUFY4Q6ZNE9 571 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 DNAAF5Q86Y56 855 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 ATP6V0A1Q93050 837 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 WNT8BQ93098 351 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 TMEM143Q96AN5 459 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 HES6Q96HZ4 224 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 STK33Q9BYT3 514 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 DDX47Q9H0S4 455 aaKnown RBP19.66■□□□□ 0.74
COL16A1-215ENST00000488897 CSDE1O75534 798 aaKnown RBP19.66■□□□□ 0.74
COL16A1-215ENST00000488897 HOXD8P13378 290 aaPredicted RBP19.66■□□□□ 0.74
COL16A1-215ENST00000488897 RARRES1P49788 294 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 GALCP54803 685 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 KCNA1Q09470 495 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 PTGISQ16647 500 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 MARCH8Q5T0T0 291 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 GDF6Q6KF10 455 aaPredicted RBP19.66■□□□□ 0.74
COL16A1-215ENST00000488897 GJB7Q6PEY0 223 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 C4orf19Q8IY42 314 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 MYCT1Q8N699 235 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 SLC30A5Q8TAD4 765 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 TRPV6Q9H1D0 765 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 TTC7AQ9ULT0 858 aaPredicted RBP19.66■□□□□ 0.74
COL16A1-215ENST00000488897 EVPLQ92817 2033 aa19.66■□□□□ 0.74
COL16A1-215ENST00000488897 EVI5O60447 810 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 MSCO60682 206 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 CCDC172P0C7W6 258 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 BIRC3Q13489 604 aa19.65■□□□□ 0.74
COL16A1-215ENST00000488897 BRDTQ58F21 947 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms