RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 KAZNQ674X7 775 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 B4GALNT4Q76KP1 1039 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 TAX1BP1Q86VP1 789 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 ARFGAP2Q8N6H7 521 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 TLCD1Q96CP7 247 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 HAUS1Q96CS2 278 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 NT5C1BQ96P26 610 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 R3HDMLQ9H3Y0 253 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 TMEM8AQ9HCN3 771 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 ASIC3Q9UHC3 531 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 ZNF541Q9H0D2 1346 aa13.56□□□□□ -0.24
CLIC4-202ENST00000488683 STBD1O95210 358 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 SCP2P22307 547 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 MAPK4P31152 587 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 JAK3P52333 1124 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 MCCD1P59942 119 aaPredicted RBP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 CYP24A1Q07973 514 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 SGO2Q562F6 1265 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 NLRX1Q86UT6 975 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 CDR2LQ86X02 465 aaPredicted RBP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 CCDC13Q8IYE1 715 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 THOC1Q96FV9 657 aaKnown RBP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 CABS1Q96KC9 395 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 C10orf88Q9H8K7 445 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 VWA5AO00534 786 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 RGS16O15492 202 aaPredicted RBP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 GH1P01241 217 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 TAS2R40P59535 323 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 KRT76Q01546 638 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 PPP2R5EQ16537 467 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 KYNUQ16719 465 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 LRRC34Q8IZ02 419 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 ANKRD42Q8N9B4 389 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 GLIS1Q8NBF1 620 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 GDAP1Q8TB36 358 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 VTI1AQ96AJ9 217 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 MFSD14AQ96MC6 490 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 FBXL18Q96ME1 805 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 PAGR1Q9BTK6 254 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 MOV10L1Q9BXT6 1211 aaKnown RBP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 POLR3FQ9H1D9 316 aaPredicted RBP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 WNT8AQ9H1J5 351 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 AAASQ9NRG9 546 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 ANKEF1Q9NU02 776 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 GTF3C4Q9UKN8 822 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 RLFQ13129 1914 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 RIPK2O43353 540 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 KRT10P13645 584 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 SMTNP53814 917 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 DRG2P55039 364 aaKnown RBP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 PRKCEQ02156 737 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 DRP2Q13474 957 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 PSPC1Q8WXF1 523 aaKnown RBP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 IWS1Q96ST2 819 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 TIPINQ9BVW5 301 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 CDC42EP4Q9H3Q1 356 aaKnown RBP13.55□□□□□ -0.24
CLIC4-202ENST00000488683 HAUS2Q9NVX0 235 aa13.55□□□□□ -0.24
CLIC4-202ENST00000488683 GOLGA6L7A0A1B0GV03 622 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 NUDT17P0C025 328 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 ZSCAN5DPP0CG00 497 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 ETS1P14921 441 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 SFNP31947 248 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 DSG3P32926 999 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 SNRPFP62306 86 aaKnown RBP13.54□□□□□ -0.24
CLIC4-202ENST00000488683 CNTN2Q02246 1040 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 ZFYVE27Q5T4F4 411 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 TDRD10Q5VZ19 366 aaKnown RBP13.54□□□□□ -0.24
CLIC4-202ENST00000488683 XPO6Q96QU8 1125 aaKnown RBP13.54□□□□□ -0.24
CLIC4-202ENST00000488683 ELAC2Q9BQ52 826 aaKnown RBP13.54□□□□□ -0.24
CLIC4-202ENST00000488683 APOBEC3GQ9HC16 384 aaKnown RBP13.54□□□□□ -0.24
CLIC4-202ENST00000488683 STK32BQ9NY57 414 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 RASAL2Q9UJF2 1139 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 PCDHA10Q9Y5I2 948 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 LRRIQ4A6NIV6 560 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 RALAP11233 206 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 CETPP11597 493 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 DRD4P21917 467 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 RWDD2BP57060 319 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 ACTN3Q08043 901 aaPredicted RBP13.54□□□□□ -0.24
CLIC4-202ENST00000488683 CYP1B1Q16678 543 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 ACAD10Q6JQN1 1059 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 TMEM270Q6UE05 265 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 C6orf89Q6UWU4 347 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 VSIG10LQ86VR7 867 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 CYP4X1Q8N118 509 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 OR5B17Q8NGF7 314 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 HACL1Q9UJ83 578 aa13.54□□□□□ -0.24
CLIC4-202ENST00000488683 MYH9P35579 1960 aaKnown RBP13.54□□□□□ -0.24
CLIC4-202ENST00000488683 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 VIMP08670 466 aaKnown RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 KCNA2P16389 499 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 ORC1Q13415 861 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 ZKSCAN8Q15776 578 aaPredicted RBP13.53□□□□□ -0.24
CLIC4-202ENST00000488683 CLEC16AQ2KHT3 1053 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 ZBTB33Q86T24 672 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 C9orf72Q96LT7 481 aa13.53□□□□□ -0.24
CLIC4-202ENST00000488683 CAMKK2Q96RR4 588 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms