RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 HRO43593 1189 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 RECQL4O94761 1208 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 XRCC6P12956 609 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNU13-208ENST00000488571 HOXA9P31269 272 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 LIN9Q5TKA1 542 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 ZC3H14Q6PJT7 736 aaKnown RBP12.55□□□□□ -0.4
SNU13-208ENST00000488571 DCLK2Q8N568 766 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 BSNDQ8WZ55 320 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 CCDC43Q96MW1 224 aaKnown RBP12.55□□□□□ -0.4
SNU13-208ENST00000488571 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 PRMT7Q9NVM4 692 aaPredicted RBP12.55□□□□□ -0.4
SNU13-208ENST00000488571 HCFC1R1Q9NWW0 138 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 USP20Q9Y2K6 914 aa12.55□□□□□ -0.4
SNU13-208ENST00000488571 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
SNU13-208ENST00000488571 BTBD18B2RXH4 712 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 NEMFO60524 1076 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 MED24O75448 989 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 THP07101 528 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 POU2F2P09086 479 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 FOSBP53539 338 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 RAB33AQ14088 237 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 MLF2Q15773 248 aaPredicted RBP12.54□□□□□ -0.4
SNU13-208ENST00000488571 PPM1LQ5SGD2 360 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 RSPO2Q6UXX9 243 aaPredicted RBP12.54□□□□□ -0.4
SNU13-208ENST00000488571 CATSPER3Q86XQ3 398 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 NOSTRINQ8IVI9 506 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 NPAS3Q8IXF0 933 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 SLC7A14Q8TBB6 771 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 WASF1Q92558 559 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 RUBCNQ92622 972 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 SHDQ96IW2 340 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 CCDC113Q9H0I3 377 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 TMEM60Q9H2L4 133 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 BRMS1Q9HCU9 246 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 DNMT3BQ9UBC3 853 aaKnown RBP12.54□□□□□ -0.4
SNU13-208ENST00000488571 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 TRIP11Q15643 1979 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 GPR179Q6PRD1 2367 aa12.54□□□□□ -0.4
SNU13-208ENST00000488571 CEP250Q9BV73 2442 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 N4BP3O15049 544 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 XYLBO75191 536 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 LARGE1O95461 756 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 FGFR3P22607 806 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 OR1D2P34982 312 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 PRKCQQ04759 706 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 ELAVL2Q12926 359 aaKnown RBP12.53□□□□□ -0.4
SNU13-208ENST00000488571 PRPF4BQ13523 1007 aaKnown RBP12.53□□□□□ -0.4
SNU13-208ENST00000488571 SLC44A4Q53GD3 710 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 AXDND1Q5T1B0 1012 aaPredicted RBP12.53□□□□□ -0.4
SNU13-208ENST00000488571 EEF1DP3Q658K8 133 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 CD300LGQ6UXG3 332 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.53□□□□□ -0.4
SNU13-208ENST00000488571 MTSS1LQ765P7 747 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 DGLUCYQ7Z3D6 616 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 ZBTB8OSQ8IWT0 167 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 NECAB1Q8N987 351 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 MCPH1Q8NEM0 835 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 KXD1Q9BQD3 176 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 MTRRQ9UBK8 725 aa12.53□□□□□ -0.4
SNU13-208ENST00000488571 TMEM189-UBE2V1I3L0A0 370 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 ACKR2O00590 384 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 PRKCBP05771 671 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 ATP2B1P20020 1258 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 CD72P21854 359 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 UBXN2BQ14CS0 331 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 ME3Q16798 604 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 UVSSAQ2YD98 709 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 ZNF528Q3MIS6 628 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 PABPC1LQ4VXU2 614 aaKnown RBP12.52□□□□□ -0.41
SNU13-208ENST00000488571 PDXDC1Q6P996 788 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 DIS3L2Q8IYB7 885 aaKnown RBP12.52□□□□□ -0.41
SNU13-208ENST00000488571 C3orf58Q8NDZ4 430 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 NSUN7Q8NE18 718 aaKnown RBP12.52□□□□□ -0.41
SNU13-208ENST00000488571 ING5Q8WYH8 240 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 PPP1R10Q96QC0 940 aaKnown RBP12.52□□□□□ -0.41
SNU13-208ENST00000488571 HINFPQ9BQA5 517 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 BCO2Q9BYV7 579 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 OSBPL6Q9BZF3 934 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 C2orf40Q9H1Z8 148 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 TUFT1Q9NNX1 390 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 LTB4R2Q9NPC1 389 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 DLL3Q9NYJ7 618 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 FBXO4Q9UKT5 387 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 GDAQ9Y2T3 454 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.41
SNU13-208ENST00000488571 COL4A2P08572 1712 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 SHISA7A6NL88 538 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 FAM170BA6NMN3 283 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
SNU13-208ENST00000488571 TKTP29401 623 aaKnown RBP12.51□□□□□ -0.41
SNU13-208ENST00000488571 NAMPTP43490 491 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
SNU13-208ENST00000488571 CLCNKBP51801 687 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 PUM1Q14671 1186 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNU13-208ENST00000488571 MAPK6Q16659 721 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 SLC5A9Q2M3M2 681 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 GLRA4Q5JXX5 417 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 GTF3C6Q969F1 213 aa12.51□□□□□ -0.41
SNU13-208ENST00000488571 NACC1Q96RE7 527 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms