RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ELMSAN1Q6PJG2 1045 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 SFR1Q86XK3 245 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 PALB2Q86YC2 1186 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 SPRYD3Q8NCJ5 442 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 LINC00301Q8NCQ3 95 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 C3orf58Q8NDZ4 430 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 C18orf25Q96B23 403 aaPredicted RBP19.39■□□□□ 0.69
ITGB1-215ENST00000488494 ZNF396Q96N95 335 aaPredicted RBP19.39■□□□□ 0.69
ITGB1-215ENST00000488494 FIZ1Q96SL8 496 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 FNIP2Q9P278 1114 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 NR2E1Q9Y466 385 aa19.39■□□□□ 0.69
ITGB1-215ENST00000488494 SPTLC2O15270 562 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 TGM5O43548 720 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 GPR37L1O60883 481 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 PIGRP01833 764 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 SPATA31D3P0C874 917 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 ZSCAN22P10073 491 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-215ENST00000488494 COL9A1P20849 921 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 NMT1P30419 496 aaKnown RBP19.38■□□□□ 0.69
ITGB1-215ENST00000488494 PSMD5Q16401 504 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 FOXD4L6Q3SYB3 417 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-215ENST00000488494 ATAT1Q5SQI0 421 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 FOXD4L3Q6VB84 417 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-215ENST00000488494 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-215ENST00000488494 CCDC73Q6ZRK6 1079 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 SPATA31D4Q6ZUB0 917 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 PIK3R5Q8WYR1 880 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 DDX12PQ92771 950 aa19.38■□□□□ 0.69
ITGB1-215ENST00000488494 TFIP11Q9UBB9 837 aaKnown RBP19.38■□□□□ 0.69
ITGB1-215ENST00000488494 CITO14578 2027 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 TRIP11Q15643 1979 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 VWA8A3KMH1 1905 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 PDCD11Q14690 1871 aaKnown RBP19.37■□□□□ 0.69
ITGB1-215ENST00000488494 MYMKA6NI61 221 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 C2CD4DB7Z1M9 353 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 I3L4J1 428 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 PODXLO00592 558 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 F13A1P00488 732 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 PKP1Q13835 747 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 SLC10A6Q3KNW5 377 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 ZC2HC1CQ53FD0 456 aaPredicted RBP19.37■□□□□ 0.69
ITGB1-215ENST00000488494 ZBTB41Q5SVQ8 909 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 DCLRE1AQ6PJP8 1040 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 CD300LGQ6UXG3 332 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 SV2BQ7L1I2 683 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 GPR149Q86SP6 731 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 MAP4K3Q8IVH8 894 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 PDILTQ8N807 584 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 TDRD5Q8NAT2 981 aaKnown RBP19.37■□□□□ 0.69
ITGB1-215ENST00000488494 PANK2Q9BZ23 570 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 TUBGCP4Q9UGJ1 667 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 DPP7Q9UHL4 492 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 RAPGEFL1Q9UHV5 662 aa19.37■□□□□ 0.69
ITGB1-215ENST00000488494 C2orf16Q68DN1 1984 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 FAM189A1O60320 539 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 RFPL2O75678 378 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 YEATS4O95619 227 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 CLTAP09496 248 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 FGFR3P22607 806 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 TKTP29401 623 aaKnown RBP19.36■□□□□ 0.69
ITGB1-215ENST00000488494 ABCD1P33897 745 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 TNFSF9P41273 254 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 GTF2BQ00403 316 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 SLC39A4Q6P5W5 647 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 C15orf39Q6ZRI6 1047 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 CMASQ8NFW8 434 aaPredicted RBP19.36■□□□□ 0.69
ITGB1-215ENST00000488494 LNX1Q8TBB1 728 aaPredicted RBP19.36■□□□□ 0.69
ITGB1-215ENST00000488494 DDX27Q96GQ7 796 aaKnown RBP19.36■□□□□ 0.69
ITGB1-215ENST00000488494 MSTO1Q9BUK6 570 aa19.36■□□□□ 0.69
ITGB1-215ENST00000488494 BRCC3P46736 316 aa19.35■□□□□ 0.69
ITGB1-215ENST00000488494 PPP2R3AQ06190 1150 aa19.35■□□□□ 0.69
ITGB1-215ENST00000488494 SPAG1Q07617 926 aa19.35■□□□□ 0.69
ITGB1-215ENST00000488494 PDXDC1Q6P996 788 aa19.35■□□□□ 0.69
ITGB1-215ENST00000488494 CCDC149Q6ZUS6 474 aa19.35■□□□□ 0.69
ITGB1-215ENST00000488494 DNAJC19Q96DA6 116 aa19.35■□□□□ 0.69
ITGB1-215ENST00000488494 CLSTN3Q9BQT9 956 aa19.35■□□□□ 0.69
ITGB1-215ENST00000488494 ST6GALNAC4Q9H4F1 302 aa19.35■□□□□ 0.69
ITGB1-215ENST00000488494 PLEKHA4Q9H4M7 779 aa19.35■□□□□ 0.69
ITGB1-215ENST00000488494 A0A0B4J269 797 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 CCDC195A0A1B0GUA6 201 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 PRR33A8MZF0 331 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 TISP43B9A030 160 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 OGTO15294 1046 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 ADAM12O43184 909 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 TRAPPC3O43617 180 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 PPP6R2O75170 966 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 PDIA4P13667 645 aaKnown RBP19.34■□□□□ 0.69
ITGB1-215ENST00000488494 GAP43P17677 238 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 ENOX2Q16206 610 aaKnown RBP19.34■□□□□ 0.69
ITGB1-215ENST00000488494 KYAT1Q16773 422 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 PTPN21Q16825 1174 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 KREMEN2Q8NCW0 462 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 KIF12Q96FN5 646 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 PLEKHA5Q9HAU0 1116 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 TBC1D7Q9P0N9 293 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 SEL1LQ9UBV2 794 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 FBXW11Q9UKB1 542 aa19.34■□□□□ 0.69
ITGB1-215ENST00000488494 TTC26A0AVF1 554 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 C1RP00736 705 aa19.33■□□□□ 0.68
ITGB1-215ENST00000488494 IDEP14735 1019 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms