RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 FZD1Q9UP38 647 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 LIMCH1Q9UPQ0 1083 aa6.31□□□□□ -1.4
VPS8-224ENST00000488255 UNC119BA6NIH7 251 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 SPATA31D3P0C874 917 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 CREMQ03060 361 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 MTM1Q13496 603 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 UBXN2BQ14CS0 331 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 C3orf36Q3SXR2 165 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 FAM102AQ5T9C2 384 aaPredicted RBP6.3□□□□□ -1.4
VPS8-224ENST00000488255 SPATA31D4Q6ZUB0 917 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 DRC7Q8IY82 874 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 OR56A1Q8NGH5 318 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 CASKIN2Q8WXE0 1202 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 ZSWIM1Q9BR11 485 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 SERPINB13Q9UIV8 391 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 ATP11BQ9Y2G3 1177 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 NOP58Q9Y2X3 529 aaKnown RBP6.3□□□□□ -1.4
VPS8-224ENST00000488255 CHST2Q9Y4C5 530 aa6.3□□□□□ -1.4
VPS8-224ENST00000488255 hCG_2014768A0A024R1R8 64 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 CENPVL1A0A0U1RR11 272 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 TEX33O43247 280 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 HTRA2O43464 458 aaPredicted RBP6.29□□□□□ -1.4
VPS8-224ENST00000488255 ANAPC15P60006 121 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 TARDBPQ13148 414 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS8-224ENST00000488255 PTPAQ15257 358 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 LY6G5CQ5SRR4 150 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 METRNLQ641Q3 311 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 LRRC55Q6ZSA7 311 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 PLXDC1Q8IUK5 500 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 VRK3Q8IV63 474 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 CPEB3Q8NE35 698 aaKnown RBP6.29□□□□□ -1.4
VPS8-224ENST00000488255 REXO4Q9GZR2 422 aaKnown RBP6.29□□□□□ -1.4
VPS8-224ENST00000488255 GSTO2Q9H4Y5 243 aa6.29□□□□□ -1.4
VPS8-224ENST00000488255 LOC105371045A0A1W2PR82 267 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 DIRC3C9JPN6 131 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 PRSS23O95084 383 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 TGFB2P61812 414 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 OTUD7BQ6GQQ9 843 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 LENG9Q96B70 501 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 COA7Q96BR5 231 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 TTPALQ9BTX7 342 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 IPPQ9Y573 584 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 FPGT-TNNI3KV9GXZ4 949 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 AATKQ6ZMQ8 1374 aa6.28□□□□□ -1.4
VPS8-224ENST00000488255 CDHR4A6H8M9 788 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 SNUPNO95149 360 aaKnown RBP6.27□□□□□ -1.41
VPS8-224ENST00000488255 EDNRBP24530 442 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 WASP42768 502 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 ATP8B2P98198 1209 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 RESTQ13127 1097 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 AGAP9Q5VTM2 703 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 GADL1Q6ZQY3 521 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 SEM1Q6ZVN7 128 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 RHOT2Q8IXI1 618 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 RPUSD2Q8IZ73 545 aaKnown RBP6.27□□□□□ -1.41
VPS8-224ENST00000488255 MIER2Q8N344 545 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 TBC1D15Q8TC07 691 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 CLPTM1LQ96KA5 538 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 C11orf54Q9H0W9 315 aaPredicted RBP6.27□□□□□ -1.41
VPS8-224ENST00000488255 KLHL11Q9NVR0 708 aa6.27□□□□□ -1.41
VPS8-224ENST00000488255 HLA-DOAP06340 250 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 DDX6P26196 483 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS8-224ENST00000488255 ZNF280AP59817 542 aaPredicted RBP6.26□□□□□ -1.41
VPS8-224ENST00000488255 CDC42EP1Q00587 391 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 ATP2B3Q16720 1220 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 BEAN1Q3B7T3 259 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 RHOUQ7L0Q8 258 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 ZBTB46Q86UZ6 589 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 MAPKAPK5Q8IW41 473 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 DCBLD1Q8N8Z6 715 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 RNF31Q96EP0 1072 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 CHFRQ96EP1 664 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 MYEOVQ96EZ4 313 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 WDR11Q9BZH6 1224 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 USP25Q9UHP3 1055 aa6.26□□□□□ -1.41
VPS8-224ENST00000488255 GAGE12BA1L429 117 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 CCDC78A2IDD5 438 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 GAGE12HA6NDE8 117 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 GRM6O15303 877 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 SBK3P0C264 359 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 ALAS1P13196 640 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 CTXN1P60606 82 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 HSD11B2P80365 405 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 MXRA7P84157 204 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 GUCY1B3Q02153 619 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 TP53BP2Q13625 1128 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 LAIR1Q6GTX8 287 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 FITM2Q8N6M3 262 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 MARS2Q96GW9 593 aaKnown RBP6.25□□□□□ -1.41
VPS8-224ENST00000488255 SLC13A1Q9BZW2 595 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 BRINP2Q9C0B6 783 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 IKZF4Q9H2S9 585 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 RNF181Q9P0P0 153 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 LUC7L2Q9Y383 392 aaKnown RBP6.25□□□□□ -1.41
VPS8-224ENST00000488255 PCDHB1Q9Y5F3 818 aa6.25□□□□□ -1.41
VPS8-224ENST00000488255 A0A087X1B8 175 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 A0A1B0GTW7 788 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 TMEM200CA6NKL6 621 aa6.24□□□□□ -1.41
VPS8-224ENST00000488255 RAMP2O60895 175 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms