RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 MRPL4Q9BYD3 311 aaKnown RBP12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 RAB34Q9BZG1 259 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 ZDHHC7Q9NXF8 308 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 EPS15L1Q9UBC2 864 aa12.32□□□□□ -0.44
PCYT1A-215ENST00000488235 MTCL1Q9Y4B5 1905 aaKnown RBP12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 KRBA1A5PL33 1030 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 TMEM189-UBE2V1I3L0A0 370 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 CCL16O15467 120 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 C1RP00736 705 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 C8AP07357 584 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 PLA2G4BP0C869 781 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 OR1D2P34982 312 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 DCLRE1AQ6PJP8 1040 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 CYP26C1Q6V0L0 522 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 SIX5Q8N196 739 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 SLC44A3Q8N4M1 653 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 FLCNQ8NFG4 579 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 DDX27Q96GQ7 796 aaKnown RBP12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 DRC1Q96MC2 740 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 TBC1D32Q96NH3 1257 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 NTPCRQ9BSD7 190 aaKnown RBP12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 PIDD1Q9HB75 910 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 HCFC1R1Q9NWW0 138 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 MTRRQ9UBK8 725 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 DPP7Q9UHL4 492 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 ZNF292O60281 2723 aa12.31□□□□□ -0.44
PCYT1A-215ENST00000488235 COL4A3Q01955 1670 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 H3BQV1 296 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 NRG2O14511 850 aaPredicted RBP12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 GALR2O43603 387 aaPredicted RBP12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 CFHP08603 1231 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 MAPTP10636 758 aaKnown RBP12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 MCF2P10911 925 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 LAMP2P13473 410 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 PLS3P13797 630 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 HTR4Q13639 388 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 RAB33AQ14088 237 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 SLC10A6Q3KNW5 377 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 AXDND1Q5T1B0 1012 aaPredicted RBP12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 MPZL3Q6UWV2 235 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 ITFG1Q8TB96 612 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 SLC7A14Q8TBB6 771 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 SPIRE2Q8WWL2 714 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 STAMQ92783 540 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 FGF14Q92915 247 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 BLOC1S4Q9NUP1 217 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 IGSF9Q9P2J2 1179 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 ANKFY1Q9P2R3 1169 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 TUBGCP4Q9UGJ1 667 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 STK24Q9Y6E0 443 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 CDY1Q9Y6F8 540 aa12.3□□□□□ -0.44
PCYT1A-215ENST00000488235 NOTCH4Q99466 2003 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 ANHXE9PGG2 379 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 PODXLO00592 558 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 TBC1D4O60343 1298 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 KCNE1P15382 129 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 FSHRP23945 695 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 CLCN5P51795 746 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 CREMQ03060 361 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 SPAG1Q07617 926 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 ELAVL2Q12926 359 aaKnown RBP12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 PPM1LQ5SGD2 360 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 ZBTB41Q5SVQ8 909 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 ELMSAN1Q6PJG2 1045 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 PARM1Q6UWI2 310 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 ATOH1Q92858 354 aaPredicted RBP12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 PRRX2Q99811 253 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 TCHPQ9BT92 498 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 MFSD1Q9H3U5 465 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 CNTN3Q9P232 1028 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 DNMT3BQ9UBC3 853 aaKnown RBP12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 CA14Q9ULX7 337 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 POLIQ9UNA4 740 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 SMC3Q9UQE7 1217 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 KIF3AQ9Y496 699 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 NUMBLQ9Y6R0 609 aa12.29□□□□□ -0.44
PCYT1A-215ENST00000488235 SPTBN4Q9H254 2564 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 TOM1L1O75674 476 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 CXCL8P10145 99 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 TNFSF9P41273 254 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 YARSP54577 528 aaKnown RBP12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 ROR1Q01973 937 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 MCL1Q07820 350 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 NOLC1Q14978 699 aaKnown RBP eCLIP12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 KARSQ15046 597 aaKnown RBP12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 VARS2Q5ST30 1063 aaKnown RBP12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 LIN9Q5TKA1 542 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 LARP1BQ659C4 914 aaKnown RBP12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 ARL6IP4Q66PJ3 421 aaKnown RBP12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 USP49Q70CQ1 688 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 GPR152Q8TDT2 470 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 FGF13Q92913 245 aa12.28□□□□□ -0.44
PCYT1A-215ENST00000488235 UROC1Q96N76 676 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms