RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SNX27Q96L92 541 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 ERGIC2Q96RQ1 377 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 NUP58Q9BVL2 599 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 VPS16Q9H269 839 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 NXF3Q9H4D5 531 aaKnown RBP11.95□□□□□ -0.5
HDLBP-242ENST00000488013 RSAD1Q9HA92 442 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 PDE11AQ9HCR9 933 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 INTS13Q9NVM9 706 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 IFNKQ9P0W0 207 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 UBQLN1Q9UMX0 589 aaKnown RBP11.95□□□□□ -0.5
HDLBP-242ENST00000488013 FRMPD3Q5JV73 1810 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 BRCA2P51587 3418 aa11.95□□□□□ -0.5
HDLBP-242ENST00000488013 WDR81Q562E7 1941 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 LACTBL1A8MY62 500 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 ZC3H11AO75152 810 aaKnown RBP eCLIP11.94□□□□□ -0.5
HDLBP-242ENST00000488013 PHACTR2O75167 634 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 TPM1P09493 284 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 CSF2RAP15509 400 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 ATF7P17544 494 aaPredicted RBP11.94□□□□□ -0.5
HDLBP-242ENST00000488013 RFX1P22670 979 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 CDC25BP30305 580 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 TNFSF9P41273 254 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 FMO5P49326 533 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 MYL7Q01449 175 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 TRIM14Q14142 442 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 EXOC3L4Q17RC7 722 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 ZACNQ401N2 412 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 MIIPQ5JXC2 388 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 ZBTB41Q5SVQ8 909 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 DEFB128Q7Z7B8 93 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 ZNF598Q86UK7 904 aaKnown RBP11.94□□□□□ -0.5
HDLBP-242ENST00000488013 CEP120Q8N960 986 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 TAF4BQ92750 862 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 MRPL9Q9BYD2 267 aaKnown RBP11.94□□□□□ -0.5
HDLBP-242ENST00000488013 IMPG2Q9BZV3 1241 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 XPO4Q9C0E2 1151 aaKnown RBP11.94□□□□□ -0.5
HDLBP-242ENST00000488013 ITGA11Q9UKX5 1188 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 COQ4Q9Y3A0 265 aa11.94□□□□□ -0.5
HDLBP-242ENST00000488013 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.5
HDLBP-242ENST00000488013 ITIH6Q6UXX5 1313 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 SMIM28A0A1B0GU29 152 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 LRRIQ3A6PVS8 624 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-242ENST00000488013 MGEA5O60502 916 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 ADCY5O95622 1261 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 FGBP02675 491 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 THP07101 528 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 ATICP31939 592 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 PNPLA4P41247 253 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 KCNJ6P48051 423 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 GCLMP48507 274 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 ZNF75DP51815 510 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 RBP5P82980 135 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 TFAMQ00059 246 aaKnown RBP11.93□□□□□ -0.5
HDLBP-242ENST00000488013 BIRC3Q13489 604 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 TRPC3Q13507 836 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 WDR44Q5JSH3 913 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 SPECC1LQ69YQ0 1117 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 SV2AQ7L0J3 742 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 RTN4RL1Q86UN2 441 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-242ENST00000488013 FBXL13Q8NEE6 735 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 DDX27Q96GQ7 796 aaKnown RBP11.93□□□□□ -0.5
HDLBP-242ENST00000488013 UROC1Q96N76 676 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 NAP1L5Q96NT1 182 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-242ENST00000488013 APOL6Q9BWW8 343 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 EDEM3Q9BZQ6 932 aa11.93□□□□□ -0.5
HDLBP-242ENST00000488013 FAM124BQ9H5Z6 455 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-242ENST00000488013 ARL5CA6NH57 179 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-242ENST00000488013 C4BPAP04003 597 aaKnown RBP11.92□□□□□ -0.5
HDLBP-242ENST00000488013 TRIM49P0CI25 452 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 TRIM49CP0CI26 452 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 P4HA1P13674 534 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 AKAP5P24588 427 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 RPL9P32969 192 aaKnown RBP11.92□□□□□ -0.5
HDLBP-242ENST00000488013 PPP3CAQ08209 521 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 MYO1EQ12965 1108 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 GRIK3Q13003 919 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 ZBTB6Q15916 424 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 SGSM1Q2NKQ1 1148 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 SEZ6Q53EL9 994 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 FIGNQ5HY92 759 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 JADE1Q6IE81 842 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 AGMOQ6ZNB7 445 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 C15orf39Q6ZRI6 1047 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 ENOSF1Q7L5Y1 443 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 TRAPPC11Q7Z392 1133 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 TTC39CQ8N584 583 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 RNF169Q8NCN4 708 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 ZSWIM2Q8NEG5 633 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 PHOSPHO2Q8TCD6 241 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 BADQ92934 168 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 PCMTD1Q96MG8 357 aaPredicted RBP11.92□□□□□ -0.5
HDLBP-242ENST00000488013 GAD1Q99259 594 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 OSBPL7Q9BZF2 842 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 TMEM117Q9H0C3 514 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 PLCB1Q9NQ66 1216 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 RAB20Q9NX57 234 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 IMPACTQ9P2X3 320 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 FBXL5Q9UKA1 691 aa11.92□□□□□ -0.5
HDLBP-242ENST00000488013 HES2Q9Y543 173 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms