RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 ZBTB45Q96K62 511 aaPredicted RBP12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 REEP2Q9BRK0 252 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 NTPCRQ9BSD7 190 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 HAPLN2Q9GZV7 340 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PLEKHA4Q9H4M7 779 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 WDR6Q9NNW5 1121 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZDHHC7Q9NXF8 308 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CNTN3Q9P232 1028 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ANKFY1Q9P2R3 1169 aa12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TICRRQ7Z2Z1 1910 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 VPS37CA5D8V6 355 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 I3L4J1 428 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SLC26A4O43511 780 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 FAM189A1O60320 539 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 HARSP12081 509 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PLCG1P19174 1290 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 FGFR3P22607 806 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TKTP29401 623 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZNF131P52739 623 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 OSTNP61366 133 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ELAVL2Q12926 359 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PTPAQ15257 358 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SF3A1Q15459 793 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 RSPO2Q6UXX9 243 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CYP26C1Q6V0L0 522 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 APBB1IPQ7Z5R6 666 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SUGP1Q8IWZ8 645 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PLCD3Q8N3E9 789 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TMEM130Q8N3G9 435 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SMG7Q92540 1137 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CDK5RAP3Q96JB5 506 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 UROC1Q96N76 676 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CCDC94Q9BW85 323 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TOPORSQ9NS56 1045 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 MTRRQ9UBK8 725 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 LIMD1Q9UGP4 676 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 DPP7Q9UHL4 492 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ODF2LQ9ULJ1 636 aa12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TOM1L1O75674 476 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZMYND10O75800 440 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 B3GAT3O94766 335 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 KCNE1P15382 129 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 RESTQ13127 1097 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 KARSQ15046 597 aaKnown RBP12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SEZ6Q53EL9 994 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CWF19L1Q69YN2 538 aaKnown RBP12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ELMSAN1Q6PJG2 1045 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ZPBP2Q6X784 338 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 OTOP3Q7RTS5 596 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 GPBP1Q86WP2 473 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 C18orf25Q96B23 403 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ACSF2Q96CM8 615 aaPredicted RBP12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 MYADMQ96S97 322 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 FIZ1Q96SL8 496 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PRKD2Q9BZL6 878 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 EPS15L1Q9UBC2 864 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TUBGCP4Q9UGJ1 667 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 DUSP12Q9UNI6 340 aa12.28□□□□□ -0.44
RAB11FIP3-210ENST00000487899 PODXLO00592 558 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 BMP15O95972 392 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 C8AP07357 584 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 CXCL8P10145 99 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 HOXA9P31269 272 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 LONP1P36776 959 aaKnown RBP12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 BRCC3P46736 316 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 MRE11P49959 708 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 YARSP54577 528 aaKnown RBP12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 MCL1Q07820 350 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TCF15Q12870 199 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 STRN3Q13033 797 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 MCM6Q14566 821 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SLC10A6Q3KNW5 377 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 FAM173BQ6P4H8 233 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SLC39A4Q6P5W5 647 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 USP49Q70CQ1 688 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 GET4Q7L5D6 327 aaPredicted RBP12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 CEP57Q86XR8 500 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 RAD54LQ92698 747 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 BACH2Q9BYV9 841 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 KCNK12Q9HB15 430 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 FBXO2Q9UK22 296 aaPredicted RBP12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 CLIC4Q9Y696 253 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 DMXL1Q9Y485 3027 aa12.27□□□□□ -0.45
RAB11FIP3-210ENST00000487899 K7ENM7 598 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 NARSO43776 548 aaKnown RBP12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PIGRP01833 764 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SYT1P21579 422 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 UBA7P41226 1012 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TNFSF9P41273 254 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 NTHL1P78549 312 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 RAB33AQ14088 237 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 ZBTB41Q5SVQ8 909 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 PDXDC1Q6P996 788 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 DCLRE1AQ6PJP8 1040 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 HAUS6Q7Z4H7 955 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 TMEM105Q8N8V8 129 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 SLC7A14Q8TBB6 771 aa12.26□□□□□ -0.45
RAB11FIP3-210ENST00000487899 RSAD2Q8WXG1 361 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms