RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 ATG2BQ96BY7 2078 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 ERVH48-1M5A8F1 160 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 ITGA4P13612 1032 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 OR1D2P34982 312 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 HOXD12P35452 270 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 ZNF76P36508 570 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 ATXN3P54252 364 aaPredicted RBP8.6□□□□□ -1.03
RTCB-205ENST00000487704 DRP2Q13474 957 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 PDZD4Q76G19 769 aaPredicted RBP8.6□□□□□ -1.03
RTCB-205ENST00000487704 NIPA1Q7RTP0 329 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 TICAM2Q86XR7 235 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 SMAP1Q8IYB5 467 aaPredicted RBP8.6□□□□□ -1.03
RTCB-205ENST00000487704 SMG8Q8ND04 991 aaKnown RBP8.6□□□□□ -1.03
RTCB-205ENST00000487704 SPATA18Q8TC71 538 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 HHIPQ96QV1 700 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 KIF2CQ99661 725 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 CORO1BQ9BR76 489 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 TMEM74BQ9NUR3 256 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 DNAAF2Q9NVR5 837 aaKnown RBP8.6□□□□□ -1.03
RTCB-205ENST00000487704 GTSE1Q9NYZ3 720 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 PCDHB9Q9Y5E1 797 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 PCDHA10Q9Y5I2 948 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 THADAQ6YHU6 1953 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 PI4KAP42356 2102 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 VWA8A3KMH1 1905 aa8.6□□□□□ -1.03
RTCB-205ENST00000487704 PTPRBP23467 1997 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 MYH9P35579 1960 aaKnown RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 IGKV6-21A0A0C4DH24 114 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 ENO4A6NNW6 628 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 E9PAM4 449 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 PYCARD-AS1I3L0S3 204 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 DDX39AO00148 427 aaKnown RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 TRDMT1O14717 391 aaKnown RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 SH3BP5O60239 455 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 MOSPD3O75425 235 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 LRG1P02750 347 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 PSAPP07602 524 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 SMARCA1P28370 1054 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 MLH1P40692 756 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 EIF2S3P41091 472 aaKnown RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 CCR10P46092 362 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 DHPSP49366 369 aaPredicted RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 DNM2P50570 870 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 SCNN1GP51170 649 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 GRSF1Q12849 480 aaKnown RBP eCLIP8.59□□□□□ -1.03
RTCB-205ENST00000487704 PTPAQ15257 358 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 TARBP2Q15633 366 aaKnown RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 ARHGAP29Q52LW3 1261 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 SPDYCQ5MJ68 293 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 CYP4A22Q5TCH4 519 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 FAM171A1Q5VUB5 890 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 PEAR1Q5VY43 1037 aaPredicted RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 FSTL4Q6MZW2 842 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 ZNF746Q6NUN9 644 aaPredicted RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 HAUS6Q7Z4H7 955 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 SLCO6A1Q86UG4 719 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 CEP57Q86XR8 500 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 PDCD7Q8N8D1 485 aaKnown RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 GSTCDQ8NEC7 633 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 RSPRY1Q96DX4 576 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 ZFP42Q96MM3 310 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 CAMK1GQ96NX5 476 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 DCBLD2Q96PD2 775 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 PI4K2AQ9BTU6 479 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 KRT23Q9C075 422 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 IFT122Q9HBG6 1241 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 POLR3BQ9NW08 1133 aaPredicted RBP8.59□□□□□ -1.03
RTCB-205ENST00000487704 SLC6A14Q9UN76 642 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 GIT1Q9Y2X7 761 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 ZMYM2Q9UBW7 1377 aa8.59□□□□□ -1.03
RTCB-205ENST00000487704 SALL3Q9BXA9 1300 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 CREBBPQ92793 2442 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 RNF40O75150 1001 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 DKK1O94907 266 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 OATP04181 439 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 C6P13671 934 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 BCKDHBP21953 392 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 DGKEP52429 567 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 EPHA5P54756 1037 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 GFPT1Q06210 699 aaPredicted RBP8.58□□□□□ -1.04
RTCB-205ENST00000487704 ELAVL2Q12926 359 aaKnown RBP8.58□□□□□ -1.04
RTCB-205ENST00000487704 HSP90AA2PQ14568 343 aaPredicted RBP8.58□□□□□ -1.04
RTCB-205ENST00000487704 UBE2SQ16763 222 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 FBXO43Q4G163 708 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 LRRC69Q6ZNQ3 347 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 TEX2Q8IWB9 1127 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 GALNT15Q8N3T1 639 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 LEMD2Q8NC56 503 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 DAGLBQ8NCG7 672 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 ZNF461Q8TAF7 563 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 CEP76Q8TAP6 659 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 PANK1Q8TE04 598 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 PIBF1Q8WXW3 757 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 RRP36Q96EU6 259 aaKnown RBP8.58□□□□□ -1.04
RTCB-205ENST00000487704 FAM227BQ96M60 508 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 SPZ1Q9BXG8 430 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 RNF39Q9H2S5 420 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 TBC1D22BQ9NU19 505 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 SNTG2Q9NY99 539 aa8.58□□□□□ -1.04
RTCB-205ENST00000487704 KCNK4Q9NYG8 393 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms