RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 TTYH3Q9C0H2 523 aa8.66□□□□□ -1.02
RBM28-206ENST00000487602 INTS2Q9H0H0 1204 aaKnown RBP8.66□□□□□ -1.02
RBM28-206ENST00000487602 WNT8AQ9H1J5 351 aa8.66□□□□□ -1.02
RBM28-206ENST00000487602 PLCB1Q9NQ66 1216 aa8.66□□□□□ -1.02
RBM28-206ENST00000487602 RGS18Q9NS28 235 aa8.66□□□□□ -1.02
RBM28-206ENST00000487602 CAPN11Q9UMQ6 739 aa8.66□□□□□ -1.02
RBM28-206ENST00000487602 DERAQ9Y315 318 aa8.66□□□□□ -1.02
RBM28-206ENST00000487602 HES2Q9Y543 173 aa8.66□□□□□ -1.02
RBM28-206ENST00000487602 PTPRJQ12913 1337 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 A0A1W2PQJ5 194 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 AKR1B15C9JRZ8 316 aaPredicted RBP8.65□□□□□ -1.02
RBM28-206ENST00000487602 RNF225M0QZC1 329 aaPredicted RBP8.65□□□□□ -1.02
RBM28-206ENST00000487602 ENPP3O14638 875 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 KIAA0355O15063 1070 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 EPHB6O15197 1021 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 RECQL4O94761 1208 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 VNN1O95497 513 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 HLA-DRAP01903 254 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TNNC2P02585 160 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 GYPCP04921 128 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 NFICP08651 508 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TPM1P09493 284 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TMEM191BP0C7N4 346 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 SKIP12755 728 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 ACTN1P12814 892 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 ITGA4P13612 1032 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 KCNE1P15382 129 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TRIM21P19474 475 aaKnown RBP8.65□□□□□ -1.02
RBM28-206ENST00000487602 AKAP5P24588 427 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 CASP14P31944 242 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TFAMQ00059 246 aaKnown RBP8.65□□□□□ -1.02
RBM28-206ENST00000487602 BIRC3Q13489 604 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TMEM132DQ14C87 1099 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TDRD10Q5VZ19 366 aaKnown RBP8.65□□□□□ -1.02
RBM28-206ENST00000487602 JADE1Q6IE81 842 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TRIM65Q6PJ69 517 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TRAPPC11Q7Z392 1133 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 ECHDC2Q86YB7 292 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TC2NQ8N9U0 490 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TAS1R2Q8TE23 839 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 SEPT8Q92599 483 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 SEMA4DQ92854 862 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 APBB2Q92870 758 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 PGBD4Q96DM1 585 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 GANQ9H2C0 597 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 TSPYL2Q9H2G4 693 aaPredicted RBP8.65□□□□□ -1.02
RBM28-206ENST00000487602 SIX2Q9NPC8 291 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 C1orf112Q9NSG2 853 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 FAM207AQ9NSI2 230 aaPredicted RBP8.65□□□□□ -1.02
RBM28-206ENST00000487602 RAB20Q9NX57 234 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 GCNT4Q9P109 453 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 CNTN3Q9P232 1028 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 FBXL5Q9UKA1 691 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 LUC7L2Q9Y383 392 aaKnown RBP8.65□□□□□ -1.02
RBM28-206ENST00000487602 C2CD2Q9Y426 696 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 DAAM1Q9Y4D1 1078 aa8.65□□□□□ -1.02
RBM28-206ENST00000487602 SMIM28A0A1B0GU29 152 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 TRIM43BA6NCK2 446 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 C9IYK1 514 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 ZC3H11AO75152 810 aaKnown RBP eCLIP8.64□□□□□ -1.03
RBM28-206ENST00000487602 PHACTR2O75167 634 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 LRRN2O75325 713 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 EOMESO95936 686 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 TIMP1P01033 207 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 CST3P01034 146 aaPredicted RBP8.64□□□□□ -1.03
RBM28-206ENST00000487602 ATF7P17544 494 aaPredicted RBP8.64□□□□□ -1.03
RBM28-206ENST00000487602 RFC2P35250 354 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 KRT9P35527 623 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 VASPP50552 380 aaPredicted RBP8.64□□□□□ -1.03
RBM28-206ENST00000487602 FXR1P51114 621 aaKnown RBP eCLIP8.64□□□□□ -1.03
RBM28-206ENST00000487602 ADKP55263 362 aaKnown RBP8.64□□□□□ -1.03
RBM28-206ENST00000487602 POLR2FP61218 127 aaKnown RBP8.64□□□□□ -1.03
RBM28-206ENST00000487602 ZBED6P86452 979 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 APBA1Q02410 837 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 GOLGA8FQ08AF8 430 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 GOLGA8DPQ0D2H9 430 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 NCOA4Q13772 614 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 ARID5BQ14865 1188 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 ZBTB6Q15916 424 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 PHLDB3Q6NSJ2 640 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 AGMOQ6ZNB7 445 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 SLC24A5Q71RS6 500 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 ZNF598Q86UK7 904 aaKnown RBP8.64□□□□□ -1.03
RBM28-206ENST00000487602 CNGA4Q8IV77 575 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 CCDC150Q8NCX0 1101 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 LINC01599Q8WXQ3 324 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 LPPQ93052 612 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 TRIM43Q96BQ3 446 aaPredicted RBP8.64□□□□□ -1.03
RBM28-206ENST00000487602 KIF12Q96FN5 646 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 ZMAT2Q96NC0 199 aaKnown RBP8.64□□□□□ -1.03
RBM28-206ENST00000487602 NAA15Q9BXJ9 866 aaKnown RBP8.64□□□□□ -1.03
RBM28-206ENST00000487602 MTMR12Q9C0I1 747 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 CXCL16Q9H2A7 254 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 UBN1Q9NPG3 1134 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 DPP3Q9NY33 737 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 KLK14Q9P0G3 267 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 CEP72Q9P209 647 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 DNAJC12Q9UKB3 198 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 GIT1Q9Y2X7 761 aa8.64□□□□□ -1.03
RBM28-206ENST00000487602 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms