RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 FGFR3P22607 806 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 NMT1P30419 496 aaKnown RBP11.2□□□□□ -0.62
RNF220-215ENST00000487332 LRPAP1P30533 357 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 CA8P35219 290 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 MTHFRP42898 656 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 CLCNKBP51801 687 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 KRT85P78386 507 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 RBM10P98175 930 aaKnown RBP11.2□□□□□ -0.62
RNF220-215ENST00000487332 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
RNF220-215ENST00000487332 PPP2R3AQ06190 1150 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 CLUL1Q15846 466 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 SLC10A6Q3KNW5 377 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 GLRA4Q5JXX5 417 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 CES5AQ6NT32 575 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 SLC39A4Q6P5W5 647 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 RTL10Q7L3V2 364 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 DYMQ7RTS9 669 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 ZBTB33Q86T24 672 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 CCDC65Q8IXS2 484 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 FBXL18Q96ME1 805 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 RIPOR3Q96MK2 946 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 ZMAT2Q96NC0 199 aaKnown RBP11.2□□□□□ -0.62
RNF220-215ENST00000487332 PAAF1Q9BRP4 392 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 TRIM9Q9C026 710 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 CXCL16Q9H2A7 254 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 ZHX3Q9H4I2 956 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 PLEKHA4Q9H4M7 779 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 FAM13BQ9NYF5 915 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 TFIP11Q9UBB9 837 aaKnown RBP11.2□□□□□ -0.62
RNF220-215ENST00000487332 CPSF3Q9UKF6 684 aaKnown RBP11.2□□□□□ -0.62
RNF220-215ENST00000487332 PCDHA7Q9UN72 937 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 DERAQ9Y315 318 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
RNF220-215ENST00000487332 MYH11P35749 1972 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 PDCD11Q14690 1871 aaKnown RBP11.19□□□□□ -0.62
RNF220-215ENST00000487332 DENND4AQ7Z401 1863 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 FAM237AA0A1B0GTK4 181 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 PI4K2BG5E9Z4 385 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 PODXLO00592 558 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 SYN3O14994 580 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 KIAA0391O15091 583 aaKnown RBP11.19□□□□□ -0.62
RNF220-215ENST00000487332 EIF3DO15371 548 aaKnown RBP eCLIP11.19□□□□□ -0.62
RNF220-215ENST00000487332 GLUD1P00367 558 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 CXCL8P10145 99 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 HARSP12081 509 aaKnown RBP11.19□□□□□ -0.62
RNF220-215ENST00000487332 EPCAMP16422 314 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 KLRC2P26717 231 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 ME1P48163 572 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 SOX4Q06945 474 aaPredicted RBP11.19□□□□□ -0.62
RNF220-215ENST00000487332 POSTNQ15063 836 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 ZBTB6Q15916 424 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 RTP2Q5QGT7 225 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 LLGL2Q6P1M3 1020 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 CD300LGQ6UXG3 332 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 STXBP4Q6ZWJ1 553 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 TAS1R1Q7RTX1 841 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 ACCSQ96QU6 501 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 C7orf25Q9BPX7 421 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 MSTO1Q9BUK6 570 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 ASB7Q9H672 318 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 TMEM206Q9H813 350 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 MRPL44Q9H9J2 332 aaKnown RBP11.19□□□□□ -0.62
RNF220-215ENST00000487332 PANK4Q9NVE7 773 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 ZDHHC7Q9NXF8 308 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 MTRRQ9UBK8 725 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 USP25Q9UHP3 1055 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 UBQLN1Q9UMX0 589 aaKnown RBP11.19□□□□□ -0.62
RNF220-215ENST00000487332 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 C2CD2Q9Y426 696 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 BACE2Q9Y5Z0 518 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 MUC3AQ02505 3323 aa11.19□□□□□ -0.62
RNF220-215ENST00000487332 B3GAT3O94766 335 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 GCNT3O95395 438 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 MYL1P05976 194 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 GARTP22102 1010 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 HOXA9P31269 272 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 MATR3P43243 847 aaKnown RBP eCLIP11.18□□□□□ -0.62
RNF220-215ENST00000487332 AARSP49588 968 aaKnown RBP eCLIP11.18□□□□□ -0.62
RNF220-215ENST00000487332 OSTNP61366 133 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 EHHADHQ08426 723 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 ENOX2Q16206 610 aaKnown RBP11.18□□□□□ -0.62
RNF220-215ENST00000487332 PSMD5Q16401 504 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 ZC2HC1CQ53FD0 456 aaPredicted RBP11.18□□□□□ -0.62
RNF220-215ENST00000487332 HERC4Q5GLZ8 1057 aaPredicted RBP11.18□□□□□ -0.62
RNF220-215ENST00000487332 FAM171A1Q5VUB5 890 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
RNF220-215ENST00000487332 ADALQ6DHV7 355 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 LILRA6Q6PI73 481 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 ANKS3Q6ZW76 656 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 UNC13DQ70J99 1090 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 GPR149Q86SP6 731 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 NT5DC4Q86YG4 428 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 PDILTQ8N807 584 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 C3orf58Q8NDZ4 430 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 LNX1Q8TBB1 728 aaPredicted RBP11.18□□□□□ -0.62
RNF220-215ENST00000487332 LEO1Q8WVC0 666 aaPredicted RBP11.18□□□□□ -0.62
RNF220-215ENST00000487332 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
RNF220-215ENST00000487332 RIN2Q8WYP3 895 aaPredicted RBP11.18□□□□□ -0.62
RNF220-215ENST00000487332 DHX58Q96C10 678 aa11.18□□□□□ -0.62
RNF220-215ENST00000487332 C1QTNF1Q9BXJ1 281 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms