RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ADAM17P78536 824 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 CYP27A1Q02318 531 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 GCNT1Q02742 428 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 CACNB2Q08289 660 aaPredicted RBP7.6□□□□□ -1.19
SF3A3-206ENST00000487062 BMS1Q14692 1282 aaKnown RBP7.6□□□□□ -1.19
SF3A3-206ENST00000487062 ENOX2Q16206 610 aaKnown RBP7.6□□□□□ -1.19
SF3A3-206ENST00000487062 ASTE1Q2TB18 679 aaPredicted RBP7.6□□□□□ -1.19
SF3A3-206ENST00000487062 DCAF4L1Q3SXM0 396 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 ZACNQ401N2 412 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 ZNF569Q5MCW4 686 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 TAF2Q6P1X5 1199 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 C15orf39Q6ZRI6 1047 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 CATSPER4Q7RTX7 472 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 RSPH3Q86UC2 560 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 ARHGEF19Q8IW93 802 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 THNSL1Q8IYQ7 743 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 PPM1KQ8N3J5 372 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 PCSK9Q8NBP7 692 aaKnown RBP7.6□□□□□ -1.19
SF3A3-206ENST00000487062 CD99L2Q8TCZ2 262 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 RAET1EQ8TD07 263 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 TAS1R2Q8TE23 839 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 ANKRD36BP1Q96IX9 119 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 PPP1R16BQ96T49 567 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 EPAS1Q99814 870 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 FAM49AQ9H0Q0 323 aaPredicted RBP7.6□□□□□ -1.19
SF3A3-206ENST00000487062 CDT1Q9H211 546 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 MINDY3Q9H8M7 445 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 PTPRHQ9HD43 1115 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 TOPORSQ9NS56 1045 aaPredicted RBP7.6□□□□□ -1.19
SF3A3-206ENST00000487062 AJAP1Q9UKB5 411 aaPredicted RBP7.6□□□□□ -1.19
SF3A3-206ENST00000487062 GUCA1BQ9UMX6 200 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 SCN10AQ9Y5Y9 1956 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 THSD7BQ9C0I4 1608 aa7.6□□□□□ -1.19
SF3A3-206ENST00000487062 CTAGE9A4FU28 777 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 M0QZ92 97 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 GPR25O00155 361 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 B4GALT5O43286 388 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 FAM189A1O60320 539 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 TSPAN1O60635 241 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 FKTNO75072 461 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 CLSTN1O94985 981 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ARF4P18085 180 aaPredicted RBP7.59□□□□□ -1.19
SF3A3-206ENST00000487062 TBXAS1P24557 533 aaPredicted RBP7.59□□□□□ -1.19
SF3A3-206ENST00000487062 USP8P40818 1118 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 TNFSF9P41273 254 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ARHGAP25P42331 645 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 VEGFBP49765 207 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 BPIFB4P59827 614 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 PTK2Q05397 1052 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 GFPT1Q06210 699 aaPredicted RBP7.59□□□□□ -1.19
SF3A3-206ENST00000487062 TRPC3Q13507 836 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 TUBB2AQ13885 445 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 NAB2Q15742 525 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 IFI16Q16666 785 aaKnown RBP7.59□□□□□ -1.19
SF3A3-206ENST00000487062 DUOXA2Q1HG44 320 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 KIZQ2M2Z5 673 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 SEZ6Q53EL9 994 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ZBTB41Q5SVQ8 909 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 TDRD10Q5VZ19 366 aaKnown RBP7.59□□□□□ -1.19
SF3A3-206ENST00000487062 EEF1DP3Q658K8 133 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 NOTUMQ6P988 496 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ZNF571Q7Z3V5 609 aaPredicted RBP7.59□□□□□ -1.19
SF3A3-206ENST00000487062 NT5DC4Q86YG4 428 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 CD302Q8IX05 232 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 RNF10Q8N5U6 811 aaKnown RBP7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ZNF784Q8NCA9 323 aaPredicted RBP7.59□□□□□ -1.19
SF3A3-206ENST00000487062 MYRIPQ8NFW9 859 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 PXYLP1Q8TE99 480 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 DNAJB3Q8WWF6 145 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 SHC3Q92529 594 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ZNF516Q92618 1163 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 SEMA4DQ92854 862 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 SECISBP2LQ93073 1101 aaKnown RBP7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ALS2CR12Q96Q35 445 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 TUBB2BQ9BVA1 445 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ADAMTS10Q9H324 1103 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 PDZD7Q9H5P4 517 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ASB7Q9H672 318 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 XPNPEP3Q9NQH7 507 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 HDAC6Q9UBN7 1215 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 ADAMTS1Q9UHI8 967 aa7.59□□□□□ -1.19
SF3A3-206ENST00000487062 A0A087X0T9 212 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 A0A1B0GUA9 196 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 FOXN3O00409 490 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 ZNF263O14978 683 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 TREHO43280 583 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 B4GALT4O60513 344 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 ADAMTS4O75173 837 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 LRRN2O75325 713 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 GPR32O75388 356 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 CSDE1O75534 798 aaKnown RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 CABYRO75952 493 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 URI1O94763 535 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 PGK1P00558 417 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 IQCF3P0C7M6 154 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 FAM228BP0C875 321 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 STAG3L1P0CL83 205 aa7.58□□□□□ -1.2
SF3A3-206ENST00000487062 DARSP14868 501 aaKnown RBP7.58□□□□□ -1.2
SF3A3-206ENST00000487062 ELNP15502 786 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms